Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | FZ922_RS11030 | Genome accession | NZ_CP043462 |
| Coordinates | 2277943..2278323 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 18WIARLN0023 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2272943..2283323
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FZ922_RS11000 (FZ922_11050) | tadA | 2273061..2273564 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| FZ922_RS11005 (FZ922_11055) | - | 2273571..2274695 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| FZ922_RS11010 (FZ922_11060) | ung | 2274692..2275405 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| FZ922_RS11015 (FZ922_11065) | - | 2275456..2276052 (-) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| FZ922_RS11020 (FZ922_11070) | gspK | 2276283..2277242 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| FZ922_RS11025 (FZ922_11075) | xcpW | 2277242..2277943 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| FZ922_RS11030 (FZ922_11080) | xcpV | 2277943..2278323 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| FZ922_RS11035 (FZ922_11085) | - | 2278313..2278867 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| FZ922_RS11040 (FZ922_11090) | - | 2278877..2279485 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| FZ922_RS11045 (FZ922_11095) | - | 2279523..2280296 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| FZ922_RS11050 (FZ922_11100) | - | 2280314..2280655 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| FZ922_RS11055 (FZ922_11105) | - | 2280667..2281647 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| FZ922_RS11060 (FZ922_11110) | kdsB | 2281659..2282420 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=384307 FZ922_RS11030 WP_000836911.1 2277943..2278323(-) (xcpV) [Acinetobacter baumannii strain 18WIARLN0023]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=384307 FZ922_RS11030 WP_000836911.1 2277943..2278323(-) (xcpV) [Acinetobacter baumannii strain 18WIARLN0023]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |