Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   FZ920_RS17745 Genome accession   NZ_CP043455
Coordinates   3676706..3677371 (+) Length   221 a.a.
NCBI ID   WP_000203219.1    Uniprot ID   A0A219CAS9
Organism   Acinetobacter baumannii strain 18WIARLN0025     
Function   regulate competence development (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
IScluster/Tn 3677428..3682122 3676706..3677371 flank 57


Gene organization within MGE regions


Location: 3676706..3682122
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FZ920_RS17745 (FZ920_17900) crp 3676706..3677371 (+) 666 WP_000203219.1 cAMP-activated global transcriptional regulator CRP Regulator
  FZ920_RS17750 (FZ920_17905) - 3677428..3678518 (+) 1091 WP_085940413.1 IS4-like element ISAba1 family transposase -
  FZ920_RS17755 (FZ920_17915) - 3678633..3679343 (-) 711 WP_000736396.1 heteromeric transposase endonuclease subunit TnsA -
  FZ920_RS17760 (FZ920_17925) - 3679735..3680037 (-) 303 WP_000251875.1 phosphoglucosamine mutase -
  FZ920_RS17765 (FZ920_17930) sul2 3680124..3680939 (-) 816 WP_001043260.1 sulfonamide-resistant dihydropteroate synthase Sul2 -
  FZ920_RS17770 (FZ920_17935) - 3681032..3682122 (+) 1091 WP_085940413.1 IS4-like element ISAba1 family transposase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 24956.78 Da        Isoelectric Point: 8.1128

>NTDB_id=384232 FZ920_RS17745 WP_000203219.1 3676706..3677371(+) (crp) [Acinetobacter baumannii strain 18WIARLN0025]
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFLCTR

Nucleotide


Download         Length: 666 bp        

>NTDB_id=384232 FZ920_RS17745 WP_000203219.1 3676706..3677371(+) (crp) [Acinetobacter baumannii strain 18WIARLN0025]
ATGACTTCAAATTTTTCACAACTCAGCACAGATGCTTTATCTCCGGGGCAACTACCTGAATCCGTTAAAGCATTGTTAAA
ACGTGCTCACATCAACAGATATCCAAAACGAACCACAATTGTTGATGCCGGAACAGAGTCAAAATCTTTATATTTAATTT
TAAAAGGCTCAGTTTCAATTATTTTACGTGAAGACGATGAACGTGAAATTGTTGTGGCATATTTGAATCCTGGTGACTTC
TTTGGGGAAATGGGGCTTTTCGAACCGAACCCTCAACGTACAGCTGAAGTTCGTACCCGTGATGTCTGTGAAATTGCGGA
AATTTCATATGACAACTTCCACGAACTGAGCAAACAGTATCCAGATCTCAGCTATGCCGTTTTCGCGCAACTCGTTCGTC
GTTTAAAAAATACAACTCGTAAAATGACCGATCTTGCATTTATTGATGTGTCAGGCCGTATTGCGCGTTGCTTAATCGAC
CTATCTTCACAACCAGAAGCAATGATCTTGCCGAATGGCCGTCAAATTCGTATTACTCGACAAGAGATTGGACGCATTGT
CGGGTGTTCACGAGAAATGGTTGGCCGTGTATTAAAGACCTTAGAAGATCAAGGTATGATTCAAACTGACGGTAAAGCTA
TTCTAATTTTTCTCTGTACACGATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, crp family (Crp)

(176-207)

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A219CAS9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

100

98.19

0.982
  crp Vibrio cholerae strain A1552

47.317

92.76

0.439
  crp Haemophilus influenzae Rd KW20

48.705

87.33

0.425

Multiple sequence alignment