Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   FY406_RS02105 Genome accession   NZ_CP043405
Coordinates   445861..446574 (+) Length   237 a.a.
NCBI ID   WP_003089827.1    Uniprot ID   A0A7X9QHV7
Organism   Streptococcus ratti strain ATCC 31377     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 440861..451574
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FY406_RS02090 (FY406_02090) - 440940..441818 (-) 879 WP_003089817.1 helix-turn-helix domain-containing protein -
  FY406_RS02095 (FY406_02095) treC 441991..443619 (-) 1629 WP_003089821.1 alpha,alpha-phosphotrehalase -
  FY406_RS02100 (FY406_02100) treP 443712..445682 (-) 1971 WP_003089824.1 PTS system trehalose-specific EIIBC component -
  FY406_RS02105 (FY406_02105) treR 445861..446574 (+) 714 WP_003089827.1 trehalose operon repressor Regulator
  FY406_RS02110 (FY406_02110) - 446950..449733 (-) 2784 WP_174267030.1 glycoside hydrolase family 66 protein -
  FY406_RS10625 (FY406_02115) - 450200..450559 (-) 360 WP_081498722.1 LPXTG cell wall anchor domain-containing protein -
  FY406_RS02120 (FY406_02120) dtd 450543..450986 (-) 444 WP_003089833.1 D-aminoacyl-tRNA deacylase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27482.52 Da        Isoelectric Point: 7.8670

>NTDB_id=383551 FY406_RS02105 WP_003089827.1 445861..446574(+) (treR) [Streptococcus ratti strain ATCC 31377]
MKKYEVIFQELQKAIADGKYQIGDYLPTETQLCQNYACSRDTVRKALQQLVKAGLIKTQQGRGSQVIKHEQIDFPVSQLT
SYQELVQQLHMNSETNVIAIDKLIVDSKLAKLTGFAPRSLLWRITRQRVVDGVASVLDTDYLDKSLVPDMTREIAEYSIY
DYLENKLKLDIAYAKKEITIDQITEKDKILLDIDSENHVVSVKSKVYLSDERQLQFTESRHKLEKFKFVDFARRQKD

Nucleotide


Download         Length: 714 bp        

>NTDB_id=383551 FY406_RS02105 WP_003089827.1 445861..446574(+) (treR) [Streptococcus ratti strain ATCC 31377]
ATGAAAAAATATGAAGTCATTTTCCAAGAACTGCAAAAGGCCATTGCTGACGGAAAATATCAGATTGGTGACTACCTGCC
TACTGAGACCCAGCTCTGCCAAAACTATGCCTGCAGCCGCGATACCGTCAGAAAAGCTCTGCAGCAGCTGGTTAAGGCAG
GACTTATCAAAACACAGCAGGGGCGCGGCTCTCAAGTCATCAAACATGAGCAGATTGACTTTCCTGTCTCTCAACTGACC
AGCTATCAAGAATTGGTTCAGCAGCTCCATATGAATTCTGAAACCAATGTTATCGCTATTGACAAGCTGATCGTTGATAG
CAAGCTAGCCAAGCTGACTGGTTTTGCACCGCGCAGCCTCCTCTGGCGTATTACCAGACAGCGCGTGGTAGATGGTGTAG
CTTCCGTTCTCGACACAGATTATCTGGACAAGTCTCTAGTTCCTGATATGACTAGGGAAATCGCTGAGTATTCTATTTAC
GATTATCTCGAAAATAAGCTTAAGTTAGATATTGCCTATGCCAAAAAAGAAATCACCATTGACCAGATCACAGAAAAAGA
TAAAATTTTGCTAGATATTGACTCAGAAAACCATGTCGTTTCGGTTAAATCTAAAGTTTATCTGAGCGATGAGCGGCAGC
TGCAGTTTACTGAAAGCCGGCATAAGCTTGAAAAATTCAAATTTGTGGATTTTGCCAGACGGCAAAAAGATTAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(90-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7X9QHV7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

76.793

100

0.768

Multiple sequence alignment