Detailed information NTG0383541

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: FY406_RS00090
• Genome accession: NZ_CP043405
• Coordinates: 20610..21494 (-)
• Length: 294 a.a.
• NCBI ID: WP_003088940.1
• Uniprot ID: -
• Organism: Streptococcus ratti strain ATCC 31377
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 15610..26494

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FY406_RS00065 (FY406_00065)	vicR	16053..16760 (-)	708	WP_003088928.1	response regulator YycF	Regulator
FY406_RS00070 (FY406_00070)	-	17110..17886 (+)	777	WP_003088930.1	amino acid ABC transporter ATP-binding protein	-
FY406_RS00075 (FY406_00075)	-	17907..18722 (+)	816	WP_003088931.1	transporter substrate-binding domain-containing protein	-
FY406_RS00080 (FY406_00080)	-	19071..19775 (+)	705	WP_003088936.1	amino acid ABC transporter permease	-
FY406_RS00085 (FY406_00085)	-	19790..20440 (+)	651	WP_003088938.1	amino acid ABC transporter permease	-
FY406_RS00090 (FY406_00090)	endA	20610..21494 (-)	885	WP_003088940.1	DNA/RNA non-specific endonuclease	Machinery gene
FY406_RS00095 (FY406_00095)	-	21541..21729 (-)	189	WP_003088941.1	DNA-directed RNA polymerase subunit beta	-
FY406_RS00100 (FY406_00100)	murA	21732..23003 (-)	1272	WP_003088943.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
FY406_RS00105 (FY406_00105)	-	23068..23301 (-)	234	WP_003088945.1	DUF1146 family protein	-
FY406_RS00110 (FY406_00110)	-	23513..23929 (-)	417	WP_003088947.1	F0F1 ATP synthase subunit epsilon	-
FY406_RS00115 (FY406_00115)	atpD	23942..25348 (-)	1407	WP_150880958.1	F0F1 ATP synthase subunit beta	-
FY406_RS00120 (FY406_00120)	-	25486..26364 (-)	879	WP_003088951.1	F0F1 ATP synthase subunit gamma	-

Sequence

Protein

• Length: 294 a.a.
• Molecular weight: 32204.08 Da
• Isoelectric Point: 10.1717

>NTDB_id=383541 FY406_RS00090 WP_003088940.1 20610..21494(-) (endA) [Streptococcus ratti strain ATCC 31377]
MARRNYRSKKKETKLLISLAAALLLLLLTYIATDERIADGNPIKQMAQLVTGKKQSPRIPSNGSQSNQTAPSQELANTVL
TASVKKSLGPHIEWNGSGAFIINHNKTDLKADVASLPYANNKTKTVQGETVPTVANALLTKATRQYRNRAETGNGTTDWK
PAGWHQLYGLNGDYDHAVDRGHLLGYALVGGLKGFDASTSNPENIATQTTWSNQASSSDSTGQNYYETMIRRALDRRKRV
RYRVTLLYEGNNILASGSHLEAKSSDGSLEFNVFIPNVQSGLTFDYATGQVRTN

Nucleotide

• Length: 885 bp

>NTDB_id=383541 FY406_RS00090 WP_003088940.1 20610..21494(-) (endA) [Streptococcus ratti strain ATCC 31377]
ATGGCGAGAAGGAATTACAGGTCCAAGAAAAAAGAAACCAAATTACTGATTTCTTTGGCAGCAGCTTTACTCCTGCTGCT
TTTGACCTATATTGCGACTGATGAGCGCATTGCTGATGGCAATCCAATAAAACAGATGGCTCAGCTGGTGACCGGAAAGA
AGCAATCTCCAAGAATTCCCTCGAATGGTTCTCAAAGCAATCAAACTGCACCCAGTCAAGAGCTGGCGAACACGGTTTTA
ACGGCCTCTGTTAAAAAATCGCTGGGACCTCATATTGAATGGAATGGCAGCGGTGCTTTTATCATCAATCATAATAAGAC
TGATCTTAAAGCTGATGTTGCCAGTCTCCCTTATGCTAATAATAAAACAAAAACAGTACAGGGAGAGACCGTTCCGACAG
TAGCTAATGCACTTTTGACCAAGGCAACGCGTCAGTACAGAAACCGCGCAGAAACAGGAAATGGGACGACCGACTGGAAG
CCCGCCGGCTGGCATCAGCTGTACGGGTTGAATGGGGACTATGACCATGCTGTTGATCGCGGGCACTTACTGGGTTATGC
TTTGGTCGGTGGTTTAAAGGGCTTTGATGCTTCAACGAGTAATCCTGAGAATATAGCAACTCAAACGACTTGGTCTAATC
AAGCCAGCAGCTCGGATTCAACCGGGCAAAATTATTATGAAACGATGATCAGAAGGGCTCTGGATCGCCGTAAGCGTGTT
CGCTACCGCGTAACTCTCCTGTACGAGGGCAATAATATTTTAGCAAGCGGCAGTCATTTAGAGGCCAAATCTTCTGATGG
CAGTTTAGAGTTTAATGTATTTATTCCCAATGTTCAGAGCGGTTTGACATTTGATTATGCTACAGGTCAGGTTAGGACCA
ATTGA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (98-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	65.714	83.333	0.548
endA	Streptococcus pneumoniae D39	65.714	83.333	0.548
endA	Streptococcus pneumoniae R6	65.714	83.333	0.548
endA	Streptococcus pneumoniae TIGR4	65.714	83.333	0.548