Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   FX981_RS15570 Genome accession   NZ_CP043404
Coordinates   3073902..3074705 (+) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus safensis strain PgKB20     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 3068902..3079705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FX981_RS15555 (FX981_03126) ahrC 3069923..3070372 (+) 450 WP_024422938.1 transcriptional regulator AhrC/ArgR -
  FX981_RS15560 (FX981_03127) recN 3070406..3072139 (+) 1734 WP_025092992.1 DNA repair protein RecN Machinery gene
  FX981_RS15565 (FX981_03128) spoIVB 3072340..3073617 (+) 1278 WP_025092993.1 SpoIVB peptidase -
  FX981_RS15570 (FX981_03129) spo0A 3073902..3074705 (+) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  FX981_RS15580 (FX981_03131) - 3075161..3076261 (+) 1101 WP_024422933.1 Rap family tetratricopeptide repeat protein -
  FX981_RS15585 (FX981_03133) - 3076491..3077228 (+) 738 WP_024422932.1 glycerophosphodiester phosphodiesterase -
  FX981_RS15590 (FX981_03134) - 3077265..3077501 (-) 237 WP_024422931.1 DUF2627 domain-containing protein -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=383530 FX981_RS15570 WP_024422935.1 3073902..3074705(+) (spo0A) [Bacillus safensis strain PgKB20]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=383530 FX981_RS15570 WP_024422935.1 3073902..3074705(+) (spo0A) [Bacillus safensis strain PgKB20]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGCCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGACATTATTATGCCTCATTTAGACGGTCTTGCTGTACTAGAACGCCTCCGTGAAAACAATGAAATGACAAAACAG
CCAAGTGTGATTATGCTAACGGCATTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTAGGCGCATCCTATTTCAT
TTTAAAGCCATTTGATATGGAAAACCTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCAATCCAAAACAGTGTTCTTCGTAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACCATC
ATTCATGAGATTGGCGTGCCCGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCTATGGTGTACAATGACAT
TGAGCTTCTCGGAAGCATCACTAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACTGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTCGCTTGGAGCAGAGGAAACATTGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCGAAACCAACCAATTCAGAATTTATTGCCATGGTAGCTGATCGTTTGCGTTTAGAGCATAGAGCAAG
CTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment