Detailed information    

insolico Bioinformatically predicted

Overview


Name   degQ   Type   Regulator
Locus tag   FX981_RS12075 Genome accession   NZ_CP043404
Coordinates   2432409..2432549 (+) Length   46 a.a.
NCBI ID   WP_003213123.1    Uniprot ID   A0A5K1N966
Organism   Bacillus safensis strain PgKB20     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 2427409..2437549
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FX981_RS12050 (FX981_02423) - 2427638..2428045 (+) 408 WP_024423329.1 YueI family protein -
  FX981_RS12055 (FX981_02424) - 2428106..2428657 (+) 552 WP_149126319.1 cysteine hydrolase family protein -
  FX981_RS12060 (FX981_02425) - 2428735..2430147 (+) 1413 WP_229137464.1 nicotinate phosphoribosyltransferase -
  FX981_RS12065 (FX981_02426) - 2430285..2431511 (+) 1227 WP_024425947.1 EAL and HDOD domain-containing protein -
  FX981_RS12070 (FX981_02427) - 2431547..2431903 (-) 357 WP_024425946.1 hypothetical protein -
  FX981_RS12075 (FX981_02428) degQ 2432409..2432549 (+) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  FX981_RS12080 (FX981_02429) - 2432701..2433624 (+) 924 WP_024425945.1 polyprenyl synthetase family protein -
  FX981_RS12085 (FX981_02430) comX 2433602..2433775 (+) 174 WP_024425944.1 competence pheromone ComX -
  FX981_RS12090 (FX981_02431) comP 2433789..2436080 (+) 2292 WP_024425943.1 ATP-binding protein Regulator
  FX981_RS12095 (FX981_02432) comA 2436161..2436802 (+) 642 WP_024423322.1 response regulator transcription factor Regulator
  FX981_RS12100 (FX981_02433) - 2436826..2437215 (+) 390 WP_024423321.1 hotdog fold thioesterase -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5677.42 Da        Isoelectric Point: 4.6828

>NTDB_id=383514 FX981_RS12075 WP_003213123.1 2432409..2432549(+) (degQ) [Bacillus safensis strain PgKB20]
MEKYEIEELKQLLWKLENEIRETTASLHNINKSIDQYDKYEYVKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=383514 FX981_RS12075 WP_003213123.1 2432409..2432549(+) (degQ) [Bacillus safensis strain PgKB20]
ATGGAAAAGTATGAAATCGAAGAACTTAAACAATTATTATGGAAACTTGAAAACGAAATCAGAGAAACAACGGCTTCTCT
TCATAACATTAACAAAAGCATTGATCAATACGACAAATATGAATATGTGAAAATTTCTTAA

Domains


Predicted by InterproScan.

(1-46)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5K1N966

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

68.085

100

0.696


Multiple sequence alignment