Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SP670_RS12110 Genome accession   NC_014498
Coordinates   2239271..2240029 (+) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae 670-6B     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2234271..2245029
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SP670_RS12080 (SP670_2379) comE 2234868..2235620 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  SP670_RS12085 (SP670_2380) comD/comD1 2235617..2236942 (-) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  SP670_RS12090 (SP670_2381) comC/comC1 2236963..2237088 (-) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  SP670_RS12100 (SP670_2382) rlmH 2237370..2237849 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SP670_RS12105 (SP670_2383) htrA 2238032..2239213 (+) 1182 WP_000681601.1 S1C family serine protease Regulator
  SP670_RS12110 (SP670_2384) spo0J 2239271..2240029 (+) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=38345 SP670_RS12110 WP_000410378.1 2239271..2240029(+) (spo0J) [Streptococcus pneumoniae 670-6B]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=38345 SP670_RS12110 WP_000410378.1 2239271..2240029(+) (spo0J) [Streptococcus pneumoniae 670-6B]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment