Detailed information NTG0383304

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: FY043_RS07240
• Genome accession: NZ_CP043396
• Coordinates: 1579981..1582194 (+)
• Length: 737 a.a.
• NCBI ID: WP_164524237.1
• Uniprot ID: -
• Organism: Pseudomonas monteilii strain 170620603RE
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1574981..1587194

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FY043_RS07215 (FY043_07385)	-	1576295..1576705 (+)	411	WP_164524236.1	hypothetical protein	-
FY043_RS07220 (FY043_07390)	-	1576857..1577480 (+)	624	WP_104835342.1	glutathione S-transferase	-
FY043_RS07225 (FY043_07395)	-	1577614..1578546 (+)	933	WP_016715124.1	ABC transporter ATP-binding protein	-
FY043_RS07230 (FY043_07400)	-	1578543..1579322 (+)	780	WP_060498742.1	ABC transporter permease	-
FY043_RS07235 (FY043_07405)	-	1579332..1579838 (-)	507	Protein_1400	DUF2062 domain-containing protein	-
FY043_RS07240 (FY043_07410)	comA	1579981..1582194 (+)	2214	WP_164524237.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
FY043_RS07245 (FY043_07415)	exbB	1582585..1583220 (+)	636	WP_016391244.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
FY043_RS07250 (FY043_07420)	-	1583217..1583651 (+)	435	WP_104835340.1	ExbD/TolR family protein	-
FY043_RS07255 (FY043_07425)	lpxK	1583651..1584652 (+)	1002	WP_060498746.1	tetraacyldisaccharide 4'-kinase	-
FY043_RS07260 (FY043_07430)	-	1584697..1584882 (+)	186	WP_003247142.1	Trm112 family protein	-
FY043_RS07265 (FY043_07435)	kdsB	1584879..1585643 (+)	765	WP_060498747.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
FY043_RS07270 (FY043_07440)	-	1585643..1586107 (+)	465	WP_060498748.1	low molecular weight protein-tyrosine-phosphatase	-
FY043_RS07275 (FY043_07445)	murB	1586104..1587123 (+)	1020	WP_060498749.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 737 a.a.
• Molecular weight: 79352.31 Da
• Isoelectric Point: 10.6918

>NTDB_id=383304 FY043_RS07240 WP_164524237.1 1579981..1582194(+) (comA) [Pseudomonas monteilii strain 170620603RE]
MRTGMFALALGLLCLGFLPALPSVGWLIALAACAVASLFTRVWPLGCFLLGLCWACGSAQLALDDRLAAGLDGRTVWLEG
RVVGLPVRTAQGVRFELDAGRSRRAELPQRLQLSWFGGPPLRAGEQWRLAVTLQRPAGLSNPHGPDREAQLLARRVGATG
TVKAGQLLAPVTGGWRDALRQRLLAVEANGRTAALVALVLGDGAGLAREDWQTLQATGTVHLLVISGQHIGLVAGLLYGL
VAGLARWGWWPARLPWLPWACGLAMTAALAYAWLAGGGVPVQRACLMLAVVLLWRLRFRHLGALLPLLLALVVVLLVEPL
AALLPGFWLSFTAVATLLYCFSARLGGWRPWQAWTRAQWVIAIGLLPVLLATGLPVSLSAPLANLVAVPWISLVVLPLAL
LGTVLLPLPVVGEALLWLAGGLLDLLFRGLALVAQQRPAWMPAVLPVWAWLLVCVGALLVLLPRGVPLRGLGGVMLLALW
VPREPVPLGQVEVWQLDVGQGLAVLLRTRHHNLLYDAGPAKGDSDLGERVVLPTLRKLGVAGLDVMLVSHAHADHAGGAA
AIQRGLPVRRTIGGEALNDVPLQPCVSGERWDWDGVRFSLWRWADGQSSNDRSCVLMVEAQGERLLLAGDMEAGAERAWL
AAAETPRVDWLQSPHHGSRSSSSEAFIRATAPRGVLISRGRNNSFGHPHVQVVERYRRYGVTIHDTAVEGALRLVLGRQG
EVEGVRGQRRFWRAQLD

Nucleotide

• Length: 2214 bp

>NTDB_id=383304 FY043_RS07240 WP_164524237.1 1579981..1582194(+) (comA) [Pseudomonas monteilii strain 170620603RE]
ATGCGCACAGGGATGTTTGCGCTCGCGCTCGGGCTGTTGTGCCTGGGCTTTCTCCCCGCATTGCCATCGGTCGGATGGTT
GATCGCGCTGGCGGCCTGCGCTGTCGCCAGTCTGTTCACCCGCGTGTGGCCGTTGGGCTGCTTTCTGCTGGGCCTGTGCT
GGGCTTGCGGGTCTGCTCAGCTGGCCCTTGATGATCGCCTGGCTGCCGGCCTGGATGGCCGCACCGTGTGGCTGGAAGGG
CGGGTGGTTGGCTTGCCGGTCCGAACGGCACAAGGCGTGCGTTTCGAGCTGGACGCGGGACGCTCGCGGCGGGCCGAACT
GCCGCAGCGCCTGCAACTGAGCTGGTTCGGTGGGCCGCCCCTGCGGGCGGGCGAGCAGTGGCGGCTGGCCGTGACCCTGC
AGCGCCCGGCCGGGCTGTCGAACCCGCATGGGCCAGACCGCGAGGCGCAACTGCTGGCACGGCGGGTGGGTGCCACGGGC
ACAGTCAAGGCGGGGCAGCTGCTGGCGCCAGTAACCGGTGGTTGGCGCGATGCGCTGCGTCAGCGCTTGCTCGCAGTCGA
GGCCAATGGCCGAACGGCGGCGTTGGTGGCGCTGGTGCTAGGTGATGGGGCGGGCCTGGCCCGGGAGGACTGGCAGACGT
TGCAGGCCACCGGCACGGTGCACCTGCTGGTGATTTCTGGCCAGCACATCGGCTTGGTCGCCGGTTTGCTGTATGGCCTG
GTTGCCGGGCTGGCACGTTGGGGTTGGTGGCCTGCACGGCTGCCCTGGTTGCCCTGGGCGTGTGGCTTGGCCATGACCGC
AGCACTGGCCTACGCTTGGCTGGCCGGTGGGGGCGTGCCGGTGCAGCGTGCCTGCCTGATGCTGGCCGTGGTGCTGCTCT
GGCGTCTGCGTTTTCGTCACCTCGGTGCATTGTTGCCGCTGTTGTTGGCGCTGGTCGTGGTGTTGCTAGTCGAACCGCTG
GCGGCATTGTTGCCGGGGTTCTGGCTGTCGTTTACCGCAGTCGCCACGCTTCTCTATTGCTTCAGTGCCCGGCTAGGGGG
CTGGCGGCCCTGGCAAGCCTGGACGCGGGCGCAATGGGTAATCGCTATCGGTTTGCTGCCAGTGTTGTTGGCCACTGGCC
TGCCGGTGAGCTTGAGTGCGCCGTTGGCCAATCTGGTAGCGGTGCCGTGGATCAGCCTGGTGGTGTTGCCGTTGGCGCTG
CTGGGCACGGTGCTGCTGCCATTGCCCGTGGTAGGGGAGGCGTTGTTATGGCTGGCGGGCGGGCTGCTGGACCTGTTGTT
CCGAGGGTTGGCGTTGGTGGCGCAACAGCGCCCGGCGTGGATGCCGGCGGTATTGCCAGTGTGGGCCTGGTTACTGGTTT
GCGTGGGGGCGCTGTTGGTGCTGCTGCCTCGGGGCGTGCCGTTGCGTGGGTTGGGGGGCGTGATGCTGTTGGCCCTGTGG
GTGCCGAGGGAGCCGGTGCCGCTTGGGCAGGTCGAAGTCTGGCAACTGGACGTCGGTCAAGGGCTGGCAGTGCTGTTGCG
CACGCGCCACCACAACCTGCTTTACGATGCCGGTCCGGCCAAGGGTGACAGTGACCTGGGCGAGCGGGTGGTGCTGCCGA
CCCTGCGCAAGCTGGGGGTGGCGGGCCTTGACGTGATGCTGGTCAGCCACGCCCATGCTGATCATGCGGGCGGCGCTGCC
GCCATCCAGCGAGGTCTGCCGGTGCGGCGGACAATCGGTGGGGAAGCGCTGAACGATGTTCCGTTGCAACCTTGTGTCAG
CGGCGAGCGATGGGACTGGGATGGCGTGCGATTTTCGCTATGGCGTTGGGCCGACGGACAGAGCAGCAATGACCGCTCGT
GCGTGCTGATGGTCGAGGCGCAGGGCGAGCGCTTGCTGCTGGCAGGGGATATGGAGGCCGGTGCCGAACGGGCCTGGCTG
GCGGCAGCCGAGACGCCGAGGGTCGACTGGTTGCAGTCGCCACACCATGGCAGCCGCAGCTCGTCCAGCGAGGCCTTCAT
CCGTGCCACGGCGCCGCGCGGGGTGCTGATTTCGCGGGGGCGCAACAATAGCTTCGGGCACCCGCATGTACAGGTGGTCG
AGCGCTATCGGCGGTATGGGGTGACGATACATGATACGGCGGTGGAGGGGGCGTTGCGGTTGGTGCTGGGGCGGCAGGGG
GAGGTTGAAGGTGTTCGGGGGCAGCGGCGGTTTTGGCGGGCTCAACTGGACTAG

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (21-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-674)

• Competence protein (Competence) (198-463)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	59.028	97.693	0.577
comA	Ralstonia pseudosolanacearum GMI1000	36.154	100	0.383