Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HF909_RS14595 Genome accession   NZ_CP051169
Coordinates   3026062..3026529 (-) Length   155 a.a.
NCBI ID   WP_016723446.1    Uniprot ID   -
Organism   Ralstonia pseudosolanacearum strain RUN2474     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3021062..3031529
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HF909_RS14580 (HF909_14675) - 3022578..3024809 (-) 2232 WP_193026388.1 methyl-accepting chemotaxis protein -
  HF909_RS14585 (HF909_14680) - 3025058..3025603 (-) 546 WP_193026389.1 chemotaxis protein CheW -
  HF909_RS14590 (HF909_14685) pilH 3025662..3026030 (-) 369 WP_003261832.1 response regulator Machinery gene
  HF909_RS14595 (HF909_14690) pilG 3026062..3026529 (-) 468 WP_016723446.1 response regulator Regulator
  HF909_RS14600 (HF909_14695) - 3026830..3027012 (-) 183 WP_003261842.1 rubredoxin -
  HF909_RS14605 (HF909_14700) hemL 3027233..3028525 (+) 1293 WP_193036790.1 glutamate-1-semialdehyde 2,1-aminomutase -
  HF909_RS14610 (HF909_14705) - 3028627..3028878 (-) 252 Protein_2866 dihydrodipicolinate synthase family protein -
  HF909_RS14615 (HF909_14710) - 3028988..3029614 (+) 627 WP_193035038.1 LemA family protein -
  HF909_RS14620 (HF909_14715) - 3029627..3030505 (+) 879 WP_193035040.1 TPM domain-containing protein -
  HF909_RS14625 (HF909_14720) - 3030521..3031042 (+) 522 WP_193026392.1 TPM domain-containing protein -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 16767.51 Da        Isoelectric Point: 8.2887

>NTDB_id=382967 HF909_RS14595 WP_016723446.1 3026062..3026529(-) (pilG) [Ralstonia pseudosolanacearum strain RUN2474]
MVAQRENMMQSARVEQLTNSQPLASSLAGRKVLVIDDSSTIRRTAQIFLSKVDCQVVLAEDGFDALAKLGDFKPDIVFCD
ILMPKLDGYLTCSLIKKSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSREALLEAVQAHLPAAAGAAQ

Nucleotide


Download         Length: 468 bp        

>NTDB_id=382967 HF909_RS14595 WP_016723446.1 3026062..3026529(-) (pilG) [Ralstonia pseudosolanacearum strain RUN2474]
GTGGTCGCGCAACGCGAGAACATGATGCAATCCGCGCGGGTGGAACAACTGACCAATTCCCAACCGCTGGCGAGTTCGCT
TGCCGGCCGAAAAGTGCTGGTGATCGACGATTCCAGTACCATCCGCCGTACCGCGCAGATTTTCCTGTCCAAGGTCGATT
GCCAAGTCGTGCTGGCCGAAGACGGGTTCGATGCGCTGGCCAAGCTGGGTGACTTCAAGCCGGACATCGTCTTTTGCGAC
ATCCTGATGCCCAAGCTGGACGGTTACCTGACCTGCTCACTGATCAAGAAAAGCCCGAAGTTTCATGCCACGCCCGTGGT
CATGCTGTCGTCGCGCGATGGGGTGTTCGACCGCGCGCGCGGCAAGCTGGTCGGGGCGGTGGACCACCTTGCCAAGCCTT
TCTCGCGGGAAGCGCTGCTGGAGGCGGTCCAGGCGCATCTGCCGGCAGCCGCTGGCGCCGCGCAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(32-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

54.622

76.774

0.419