Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FXN65_RS01640 Genome accession   NZ_CP043311
Coordinates   340306..340713 (+) Length   135 a.a.
NCBI ID   WP_003455569.1    Uniprot ID   A0AAD1BY44
Organism   Metapseudomonas lalkuanensis strain PE08     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 335306..345713
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FXN65_RS01610 (FXN65_01610) - 335427..336434 (-) 1008 WP_151131348.1 aspartate carbamoyltransferase catalytic subunit -
  FXN65_RS01615 (FXN65_01615) pyrR 336471..336983 (-) 513 WP_151131349.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  FXN65_RS01620 (FXN65_01620) ruvX 337006..337446 (-) 441 WP_151131350.1 Holliday junction resolvase RuvX -
  FXN65_RS01625 (FXN65_01625) - 337446..338012 (-) 567 WP_151131351.1 YqgE/AlgH family protein -
  FXN65_RS01630 (FXN65_01630) - 338126..339019 (-) 894 WP_151131352.1 energy transducer TonB -
  FXN65_RS01635 (FXN65_01635) gshB 339076..340038 (-) 963 WP_151131353.1 glutathione synthase -
  FXN65_RS01640 (FXN65_01640) pilG 340306..340713 (+) 408 WP_003455569.1 twitching motility response regulator PilG Regulator
  FXN65_RS01645 (FXN65_01645) pilH 340759..341124 (+) 366 WP_151131354.1 twitching motility response regulator PilH -
  FXN65_RS01650 (FXN65_01650) - 341180..341716 (+) 537 WP_151131355.1 chemotaxis protein CheW -
  FXN65_RS01655 (FXN65_01655) - 341856..343904 (+) 2049 WP_151131356.1 methyl-accepting chemotaxis protein -
  FXN65_RS01660 (FXN65_01660) - 343967..344827 (+) 861 WP_151138630.1 protein-glutamate O-methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14828.19 Da        Isoelectric Point: 6.7128

>NTDB_id=382791 FXN65_RS01640 WP_003455569.1 340306..340713(+) (pilG) [Metapseudomonas lalkuanensis strain PE08]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCEVITAVDGFDALAKIADSHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKTHVPDFTPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=382791 FXN65_RS01640 WP_003455569.1 340306..340713(+) (pilG) [Metapseudomonas lalkuanensis strain PE08]
ATGGAACAGCATTCCGAGGGTTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGTACAGCCGAGACTCTGCT
CAAGAAAGTGGGGTGCGAGGTCATCACCGCGGTTGATGGTTTCGATGCCCTGGCCAAGATCGCCGATTCCCACCCGAACA
TCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTATCAGACCTGCGCCCTGATCAAGAACAACAGTGCTTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGTCGCATCGTCGGTTCCGATCAGTA
CCTCACCAAGCCCTTCAGCAAGGAAGAGCTGCTCGGCGCGATCAAGACTCACGTCCCCGATTTCACCCCGGTGGAGCAAG
CCTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76.8

92.593

0.711
  vicR Streptococcus mutans UA159

41.27

93.333

0.385

Multiple sequence alignment