Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FQP84_RS09330 | Genome accession | NZ_CP043302 |
| Coordinates | 1817108..1817503 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain 16445 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1812108..1822503
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FQP84_RS09300 (FQP84_09300) | - | 1813367..1813771 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| FQP84_RS09305 (FQP84_09305) | - | 1814109..1814201 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| FQP84_RS09310 (FQP84_09310) | - | 1814333..1814566 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| FQP84_RS09315 (FQP84_09315) | murA | 1814677..1815942 (+) | 1266 | WP_000358000.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| FQP84_RS09320 (FQP84_09320) | fabZ | 1815976..1816416 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| FQP84_RS09325 (FQP84_09325) | - | 1816474..1816914 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| FQP84_RS09330 (FQP84_09330) | ssb | 1817108..1817503 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| FQP84_RS09335 (FQP84_09335) | sceD | 1817892..1818587 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| FQP84_RS09340 (FQP84_09340) | tenA | 1818973..1819662 (+) | 690 | WP_000396075.1 | thiaminase II | - |
| FQP84_RS09345 (FQP84_09345) | thiD | 1819655..1820485 (+) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FQP84_RS09350 (FQP84_09350) | thiM | 1820469..1821260 (+) | 792 | WP_001108476.1 | hydroxyethylthiazole kinase | - |
| FQP84_RS09355 (FQP84_09355) | thiE | 1821262..1821903 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=382721 FQP84_RS09330 WP_000932694.1 1817108..1817503(+) (ssb) [Staphylococcus aureus strain 16445]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=382721 FQP84_RS09330 WP_000932694.1 1817108..1817503(+) (ssb) [Staphylococcus aureus strain 16445]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |