Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   HFV09_RS02125 Genome accession   NZ_CP051138
Coordinates   414874..415908 (+) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain 4063-05     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 409874..420908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HFV09_RS02095 tsaE 410939..411400 (+) 462 WP_173948613.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  HFV09_RS02100 - 411375..411899 (+) 525 WP_002994338.1 GNAT family N-acetyltransferase -
  HFV09_RS02105 - 411908..413191 (+) 1284 WP_002983372.1 LCP family protein -
  HFV09_RS02110 - 413302..413658 (-) 357 WP_002983373.1 hypothetical protein -
  HFV09_RS02115 - 413655..414074 (-) 420 WP_002983376.1 HIT family protein -
  HFV09_RS02120 pptA 414146..414871 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  HFV09_RS02125 pptB 414874..415908 (+) 1035 WP_010922583.1 ABC transporter permease Regulator
  HFV09_RS02130 ccrZ 415972..416763 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  HFV09_RS02135 trmB 416763..417398 (+) 636 WP_173948615.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  HFV09_RS02145 rimP 417657..418193 (+) 537 WP_011528897.1 ribosome maturation factor RimP -
  HFV09_RS02150 nusA 418368..419525 (+) 1158 WP_002983485.1 transcription termination factor NusA -
  HFV09_RS02155 - 419541..419837 (+) 297 WP_002983486.1 YlxR family protein -
  HFV09_RS02160 - 419830..420132 (+) 303 WP_002983488.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=382685 HFV09_RS02125 WP_010922583.1 414874..415908(+) (pptB) [Streptococcus pyogenes strain 4063-05]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=382685 HFV09_RS02125 WP_010922583.1 414874..415908(+) (pptB) [Streptococcus pyogenes strain 4063-05]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427


Multiple sequence alignment