Detailed information NTG0382650

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: GRB95_RS10235
• Genome accession: NZ_CP051004
• Coordinates: 2009811..2010920 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264863.1
• Uniprot ID: Q8DWQ8
• Organism: Streptococcus agalactiae 515
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2004811..2015920

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GRB95_RS10210 (GRB95_10210)	-	2005183..2006022 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
GRB95_RS10215 (GRB95_10215)	pgsA	2006022..2006564 (-)	543	WP_000976003.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
GRB95_RS10220 (GRB95_10220)	-	2006687..2007970 (-)	1284	WP_000217754.1	pitrilysin family protein	-
GRB95_RS10225 (GRB95_10225)	-	2007972..2009216 (-)	1245	WP_000706188.1	pitrilysin family protein	-
GRB95_RS10230 (GRB95_10230)	yaaA	2009455..2009808 (+)	354	WP_000384871.1	S4 domain-containing protein YaaA	-
GRB95_RS10235 (GRB95_10235)	recF	2009811..2010920 (+)	1110	WP_000264863.1	DNA replication/repair protein RecF	Machinery gene
GRB95_RS10240 (GRB95_10240)	-	2010932..2011798 (-)	867	WP_000398683.1	GRP family sugar transporter	-
GRB95_RS10245 (GRB95_10245)	-	2011854..2012516 (-)	663	WP_001865840.1	helix-turn-helix transcriptional regulator	-
GRB95_RS10250 (GRB95_10250)	guaB	2012591..2014072 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
GRB95_RS10255 (GRB95_10255)	-	2014229..2014714 (-)	486	WP_001034427.1	arginine repressor	-
GRB95_RS10260 (GRB95_10260)	-	2014724..2015404 (-)	681	WP_000628851.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42526.35 Da
• Isoelectric Point: 7.3132

>NTDB_id=382650 GRB95_RS10235 WP_000264863.1 2009811..2010920(+) (recF) [Streptococcus agalactiae 515]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LNLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLTVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFASQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=382650 GRB95_RS10235 WP_000264863.1 2009811..2010920(+) (recF) [Streptococcus agalactiae 515]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCACCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGTGGCCAT
CTTAACTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAAGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGTCTAAGACGAAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTAACAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGCTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q8DWQ8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.085	98.374	0.621
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444