Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   HEP85_RS22655 Genome accession   NZ_CP050975
Coordinates   5184617..5185741 (-) Length   374 a.a.
NCBI ID   WP_168529366.1    Uniprot ID   A0ABW3XRM5
Organism   Streptomyces sp. RPA4-2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5179617..5190741
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HEP85_RS22630 (HEP85_22870) cseB 5180049..5180759 (-) 711 WP_168529356.1 two-component system response regulator CseB -
  HEP85_RS22635 (HEP85_22875) - 5180789..5181385 (-) 597 WP_168529358.1 hypothetical protein -
  HEP85_RS22640 (HEP85_22880) - 5181436..5181987 (-) 552 WP_168529360.1 SigE family RNA polymerase sigma factor -
  HEP85_RS22645 (HEP85_22885) - 5182256..5183176 (-) 921 WP_168529362.1 A/G-specific adenine glycosylase -
  HEP85_RS22650 (HEP85_22890) - 5183664..5184473 (+) 810 WP_168529364.1 hypothetical protein -
  HEP85_RS22655 (HEP85_22895) disA 5184617..5185741 (-) 1125 WP_168529366.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  HEP85_RS22660 (HEP85_22900) radA/sms 5185810..5187219 (-) 1410 WP_168529368.1 DNA repair protein RadA Machinery gene
  HEP85_RS22665 (HEP85_22905) - 5187493..5189252 (+) 1760 Protein_4464 hypothetical protein -
  HEP85_RS22670 (HEP85_22910) - 5189256..5190116 (-) 861 WP_168529370.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40178.04 Da        Isoelectric Point: 5.0058

>NTDB_id=382345 HEP85_RS22655 WP_168529366.1 5184617..5185741(-) (disA) [Streptomyces sp. RPA4-2]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVIDKDLTKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALFELNALAHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=382345 HEP85_RS22655 WP_168529366.1 5184617..5185741(-) (disA) [Streptomyces sp. RPA4-2]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCATT
GAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGGCTCGAACGAATTCTCCGCGGCAACACCGGCGGACTCATCGTGC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTACTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGATCGACAAGGACCTCACCAAGATCCTCCGGGCGGGCGTGCAACTGGTGCC
GGACCCGACGATCCCCACCGAGGAGACGGGTACGCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGGCTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGGCTCATCGCCCTCTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCCGCCGCG
ATCCTCTCGCGTGCCAACCAGGCTCTCGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCACTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGTCGGCGGTGGCCCAGCGTCTGGAGATGGTGCGCCGCATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGTTGGGCACCGACGGACGTCTGCTCGCCCTCCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCCGAGCGTGAGCTGGTGGTCCGCGACTACGTGCCCGAGCCCACCGCGAAGCGCTCCCGCACGGTCGACGA
GGCCCTCTTCGAGCTGAACGCCCTCGCCCATGCCGAGCTGCTCGAACTGCCCACGGTGGCAAGGGCGTTGGGTTACACCG
GCTCCCCCGAGGCACTCGACTCCGCGGTCTCGCCGCGCGGCTTCCGGCTCCTCGCGAAGGTCCCGCGTCTGCCCGGCGCG
ATCATCGACCGTCTCGTCGAGCACTTCGGCGGTCTGCAGAAGCTTCTCGCGGCCAGCGTCGACGATCTCCAGGCGGTCGA
CGGGGTGGGCGAGGCGCGGGCGCGCAGCGTACGCGAGGGGCTTTCGCGGCTGGCGGAGTCGTCGATCCTGGAACGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433


Multiple sequence alignment