Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BSUW23_RS12425 | Genome accession | NC_014479 |
| Coordinates | 2415749..2416819 (-) | Length | 356 a.a. |
| NCBI ID | WP_003226312.1 | Uniprot ID | - |
| Organism | Bacillus spizizenii str. W23 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2410749..2421819
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSUW23_RS12380 (BSUW23_12200) | tapA | 2411230..2411991 (-) | 762 | WP_003226335.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BSUW23_RS12385 (BSUW23_12205) | - | 2412260..2412586 (+) | 327 | WP_079996407.1 | YqzG/YhdC family protein | - |
| BSUW23_RS12390 (BSUW23_12210) | - | 2412628..2412807 (-) | 180 | WP_003226330.1 | YqzE family protein | - |
| BSUW23_RS12395 (BSUW23_12215) | comGG | 2412879..2413253 (-) | 375 | WP_003226328.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| BSUW23_RS12400 (BSUW23_12220) | comGF | 2413254..2413637 (-) | 384 | WP_032727308.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| BSUW23_RS12405 (BSUW23_12225) | comGE | 2413663..2414010 (-) | 348 | WP_003226323.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| BSUW23_RS12410 (BSUW23_12230) | comGD | 2413994..2414425 (-) | 432 | WP_003226321.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| BSUW23_RS12415 (BSUW23_12235) | comGC | 2414415..2414711 (-) | 297 | WP_003226319.1 | comG operon protein ComGC | Machinery gene |
| BSUW23_RS12420 (BSUW23_12240) | comGB | 2414725..2415762 (-) | 1038 | WP_003226315.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| BSUW23_RS12425 (BSUW23_12245) | comGA | 2415749..2416819 (-) | 1071 | WP_003226312.1 | competence protein ComGA | Machinery gene |
| BSUW23_RS12430 (BSUW23_12250) | - | 2417032..2417442 (-) | 411 | WP_032727412.1 | CBS domain-containing protein | - |
| BSUW23_RS12435 (BSUW23_12255) | - | 2417505..2418458 (-) | 954 | WP_003226308.1 | magnesium transporter CorA family protein | - |
| BSUW23_RS12440 (BSUW23_12260) | - | 2418602..2419930 (+) | 1329 | WP_044428668.1 | hemolysin family protein | - |
| BSUW23_RS12445 (BSUW23_12265) | - | 2419982..2420821 (-) | 840 | WP_003226304.1 | STAS domain-containing protein | - |
| BSUW23_RS12455 (BSUW23_12270) | mgsR | 2421047..2421424 (-) | 378 | WP_003226302.1 | transcriptional regulator MgsR | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40489.75 Da Isoelectric Point: 9.0214
>NTDB_id=38201 BSUW23_RS12425 WP_003226312.1 2415749..2416819(-) (comGA) [Bacillus spizizenii str. W23]
MDSIEKISKTLIEEAYITKASDIHIVPRERDAIIHFRVDHALLKKRHMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLEEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAKIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQLRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRHIIRKGIALGYLTTNNYDRWVYHETD
MDSIEKISKTLIEEAYITKASDIHIVPRERDAIIHFRVDHALLKKRHMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLEEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAKIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQLRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRHIIRKGIALGYLTTNNYDRWVYHETD
Nucleotide
Download Length: 1071 bp
>NTDB_id=38201 BSUW23_RS12425 WP_003226312.1 2415749..2416819(-) (comGA) [Bacillus spizizenii str. W23]
TTGGATTCAATAGAAAAGATAAGCAAAACCTTGATTGAAGAGGCATATATAACAAAGGCTTCTGACATTCACATTGTACC
GAGGGAGCGGGACGCCATCATTCATTTTCGGGTTGATCATGCCTTGCTGAAAAAAAGGCACATGAAAAAAGAAGAGTGCG
TAAGGCTGATTTCACATTTTAAATTTCTCTCAGCGATGGACATAGGGGAAAGGAGGAAGCCGCAAAATGGTTCGCTTACA
TTAAAGCTAGAGGAGGGAAATGTTCATTTAAGAATGTCAACGCTCCCCACAATTAATGAAGAAAGCCTTGTGATCAGAGT
GATGCCTCAATATAATATCCCTTCGATTGATAAGCTGTCATTATTTCCGAAGACAGGAGCCACTTTACTCTCATTTTTAA
AACATTCCCACGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACCACCACATTATACTCTCTTGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACACTGGAGGACCCTGTTGAAACAAGGGACGAGGATGTTCTTCAGGTGCA
GGTGAATGAAAAAGCCGGTGTGACATATTCCGCAGGGCTGAAGGCTATTTTGCGCCATGACCCGGATATGATTATCTTAG
GTGAGATCAGAGACGCCGAAACAGCTAAAATCGCGGTACGGGCAGCGATGACGGGGCATCTGGTGCTGACGAGCCTTCAT
ACGAGAGATGCGAAGGGCGCGATTTACAGGCTGCTTGAATTCGGCATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGCCAGTTAC
GAAACACCAGGAGAGCAAGCGTTTATGAGCTCCTTTACGGAAAAAATCTTCAGCAATGTATTCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTACGTCACATTATCCGAAAAGGAATTGCACTCGGCTATTTGACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAACAGATTAG
TTGGATTCAATAGAAAAGATAAGCAAAACCTTGATTGAAGAGGCATATATAACAAAGGCTTCTGACATTCACATTGTACC
GAGGGAGCGGGACGCCATCATTCATTTTCGGGTTGATCATGCCTTGCTGAAAAAAAGGCACATGAAAAAAGAAGAGTGCG
TAAGGCTGATTTCACATTTTAAATTTCTCTCAGCGATGGACATAGGGGAAAGGAGGAAGCCGCAAAATGGTTCGCTTACA
TTAAAGCTAGAGGAGGGAAATGTTCATTTAAGAATGTCAACGCTCCCCACAATTAATGAAGAAAGCCTTGTGATCAGAGT
GATGCCTCAATATAATATCCCTTCGATTGATAAGCTGTCATTATTTCCGAAGACAGGAGCCACTTTACTCTCATTTTTAA
AACATTCCCACGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACCACCACATTATACTCTCTTGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACACTGGAGGACCCTGTTGAAACAAGGGACGAGGATGTTCTTCAGGTGCA
GGTGAATGAAAAAGCCGGTGTGACATATTCCGCAGGGCTGAAGGCTATTTTGCGCCATGACCCGGATATGATTATCTTAG
GTGAGATCAGAGACGCCGAAACAGCTAAAATCGCGGTACGGGCAGCGATGACGGGGCATCTGGTGCTGACGAGCCTTCAT
ACGAGAGATGCGAAGGGCGCGATTTACAGGCTGCTTGAATTCGGCATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGCCAGTTAC
GAAACACCAGGAGAGCAAGCGTTTATGAGCTCCTTTACGGAAAAAATCTTCAGCAATGTATTCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTACGTCACATTATCCGAAAAGGAATTGCACTCGGCTATTTGACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAACAGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
97.472 |
100 |
0.975 |