Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   HB370_RS22920 Genome accession   NZ_CP050504
Coordinates   5025550..5026674 (-) Length   374 a.a.
NCBI ID   WP_030781598.1    Uniprot ID   A0ABQ3RJX6
Organism   Streptomyces sp. DSM 40868     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5020550..5031674
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB370_RS22895 (HB370_22895) cseB 5021336..5022034 (-) 699 WP_030781612.1 two-component system response regulator CseB -
  HB370_RS22900 (HB370_22900) - 5022073..5022672 (-) 600 WP_037701471.1 hypothetical protein -
  HB370_RS22905 (HB370_22905) - 5022714..5023253 (-) 540 WP_030781607.1 SigE family RNA polymerase sigma factor -
  HB370_RS22910 (HB370_22910) - 5023528..5024403 (-) 876 WP_030781604.1 A/G-specific adenine glycosylase -
  HB370_RS22915 (HB370_22915) - 5024583..5025419 (+) 837 WP_208974431.1 hypothetical protein -
  HB370_RS22920 (HB370_22920) disA 5025550..5026674 (-) 1125 WP_030781598.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  HB370_RS22925 (HB370_22925) radA 5026756..5028165 (-) 1410 WP_030781596.1 DNA repair protein RadA Machinery gene
  HB370_RS22930 (HB370_22930) - 5028353..5030236 (+) 1884 WP_037701486.1 hypothetical protein -
  HB370_RS22935 (HB370_22935) - 5030285..5031142 (-) 858 WP_030781592.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 39980.71 Da        Isoelectric Point: 4.9235

>NTDB_id=381026 HB370_RS22920 WP_030781598.1 5025550..5026674(-) (disA) [Streptomyces sp. DSM 40868]
MAANDRAAAPGKSGGSAGSDGLMRASLSAVAPGTPLRDGLERVLRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPDRELVVRDYVPEPTAKRSRTVEEALAELDALTHAELLELGTVARALGYTASPESLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=381026 HB370_RS22920 WP_030781598.1 5025550..5026674(-) (disA) [Streptomyces sp. DSM 40868]
GTGGCAGCCAACGACCGGGCAGCGGCTCCCGGCAAGTCCGGTGGGAGTGCCGGTTCCGACGGTCTGATGCGCGCCTCGCT
GAGCGCCGTGGCGCCGGGCACGCCCCTGCGCGACGGCCTGGAACGGGTTCTGCGCGGCAACACCGGCGGTCTCATCGTCC
TCGGCTCGGACAAGACGGTCGAGGCGATGTGCACGGGCGGGTTCGTGCTGGACGTCGAGTTCACGGCCACCCGGCTGCGG
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTGTCGTCGGACCTGTCGAAGATCCTGCGCGCGGGCGTCCAGCTGGTGCC
GGACCCGACGATCCCCACGGAGGAGACGGGCACGCGGCACCGCACGGCGGACCGGGTGAGCAAGCAGGTCGGCTTCCCGG
TGGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCCCTGTACGTGGACGGTCAGCGGCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCGAACCAGGCGCTGGCGACGCTGGAGCGGTACAAGCTGCGGCTGGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCGGCGGTCGCGCAGCGGCTGGAGATGGTCCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTCGAGCTGGGCACCGACGGCCGGCTTCTCGCGCTCCAGCTGGAGGAGCTGATCGCG
GGGGTCGAGCCGGACCGCGAGCTGGTCGTCCGCGACTATGTGCCCGAGCCGACGGCGAAGCGGTCCCGCACGGTCGAGGA
GGCGCTGGCCGAGCTGGACGCGCTGACCCACGCGGAACTGCTGGAACTGGGCACGGTGGCGCGTGCGCTGGGCTACACCG
CGTCGCCCGAGTCGCTGGACTCGGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGCGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGGGGCCTGCAGAAGCTGCTGGCCGCGAGCGTGGACGACCTGCAGACCGTGGA
CGGCGTGGGCGAGGCGCGGGCGCGCAGCGTACGGGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

47.11

92.513

0.436