Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | FRD49_RS10160 | Genome accession | NZ_CP042994 |
| Coordinates | 2144542..2144922 (-) | Length | 126 a.a. |
| NCBI ID | WP_004887479.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis strain J1A | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2139542..2149922
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FRD49_RS10135 (FRD49_10135) | - | 2140003..2141127 (-) | 1125 | WP_006580787.1 | enoyl-CoA hydratase/isomerase family protein | - |
| FRD49_RS10140 (FRD49_10140) | ung | 2141124..2141837 (-) | 714 | WP_032011224.1 | uracil-DNA glycosylase | - |
| FRD49_RS10145 (FRD49_10145) | - | 2141888..2142484 (-) | 597 | WP_032011226.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| FRD49_RS10150 (FRD49_10150) | gspK | 2142714..2143673 (-) | 960 | WP_032011227.1 | type II secretion system minor pseudopilin GspK | - |
| FRD49_RS10155 (FRD49_10155) | xcpW | 2143673..2144542 (-) | 870 | WP_032011228.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| FRD49_RS10160 (FRD49_10160) | xcpV | 2144542..2144922 (-) | 381 | WP_004887479.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| FRD49_RS10165 (FRD49_10165) | - | 2144912..2145463 (-) | 552 | WP_002049902.1 | type II secretion system protein | - |
| FRD49_RS10170 (FRD49_10170) | - | 2145473..2146081 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| FRD49_RS10175 (FRD49_10175) | - | 2146119..2146892 (-) | 774 | WP_004709116.1 | TatD family hydrolase | - |
| FRD49_RS10180 (FRD49_10180) | - | 2146910..2147251 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| FRD49_RS10185 (FRD49_10185) | - | 2147264..2148244 (-) | 981 | WP_032011231.1 | DNA polymerase III subunit delta' | - |
| FRD49_RS10190 (FRD49_10190) | kdsB | 2148256..2149017 (-) | 762 | WP_004709120.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14024.27 Da Isoelectric Point: 9.7155
>NTDB_id=380041 FRD49_RS10160 WP_004887479.1 2144542..2144922(-) (xcpV) [Acinetobacter nosocomialis strain J1A]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIAMMEINQEWLQGTQTKQVTSQGETWQI
YKSAESTVSPNVQKIDVQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIAMMEINQEWLQGTQTKQVTSQGETWQI
YKSAESTVSPNVQKIDVQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=380041 FRD49_RS10160 WP_004887479.1 2144542..2144922(-) (xcpV) [Acinetobacter nosocomialis strain J1A]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTAGCAGCTGTTGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCTACTTCTAATGCCATTTTAAGAACTAAAGCTCAATTTGTAGCTATGAATGAAATTG
CTATGATGGAGATTAATCAAGAGTGGCTGCAGGGCACTCAAACTAAGCAAGTAACTTCTCAAGGAGAGACTTGGCAGATT
TATAAATCAGCTGAATCAACTGTTAGCCCTAATGTTCAAAAAATTGATGTACAAGTTAGCTTATATGATCCGGATAAGGG
AAAAGTACAAAACGGTATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTAGCAGCTGTTGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCTACTTCTAATGCCATTTTAAGAACTAAAGCTCAATTTGTAGCTATGAATGAAATTG
CTATGATGGAGATTAATCAAGAGTGGCTGCAGGGCACTCAAACTAAGCAAGTAACTTCTCAAGGAGAGACTTGGCAGATT
TATAAATCAGCTGAATCAACTGTTAGCCCTAATGTTCAAAAAATTGATGTACAAGTTAGCTTATATGATCCGGATAAGGG
AAAAGTACAAAACGGTATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
95.238 |
100 |
0.952 |