Detailed information NTG0380040

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: FRD49_RS10155
• Genome accession: NZ_CP042994
• Coordinates: 2143673..2144542 (-)
• Length: 289 a.a.
• NCBI ID: WP_032011228.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis strain J1A
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2138673..2149542

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FRD49_RS10125 (FRD49_10125)	-	2138983..2139423 (-)	441	WP_002050033.1	SRPBCC family protein	-
FRD49_RS10130 (FRD49_10130)	tadA	2139493..2139996 (-)	504	WP_032011223.1	tRNA adenosine(34) deaminase TadA	-
FRD49_RS10135 (FRD49_10135)	-	2140003..2141127 (-)	1125	WP_006580787.1	enoyl-CoA hydratase/isomerase family protein	-
FRD49_RS10140 (FRD49_10140)	ung	2141124..2141837 (-)	714	WP_032011224.1	uracil-DNA glycosylase	-
FRD49_RS10145 (FRD49_10145)	-	2141888..2142484 (-)	597	WP_032011226.1	6-pyruvoyl trahydropterin synthase family protein	-
FRD49_RS10150 (FRD49_10150)	gspK	2142714..2143673 (-)	960	WP_032011227.1	type II secretion system minor pseudopilin GspK	-
FRD49_RS10155 (FRD49_10155)	xcpW	2143673..2144542 (-)	870	WP_032011228.1	type II secretion system minor pseudopilin GspJ	Machinery gene
FRD49_RS10160 (FRD49_10160)	xcpV	2144542..2144922 (-)	381	WP_004887479.1	type II secretion system minor pseudopilin GspI	Machinery gene
FRD49_RS10165 (FRD49_10165)	-	2144912..2145463 (-)	552	WP_002049902.1	type II secretion system protein	-
FRD49_RS10170 (FRD49_10170)	-	2145473..2146081 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
FRD49_RS10175 (FRD49_10175)	-	2146119..2146892 (-)	774	WP_004709116.1	TatD family hydrolase	-
FRD49_RS10180 (FRD49_10180)	-	2146910..2147251 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
FRD49_RS10185 (FRD49_10185)	-	2147264..2148244 (-)	981	WP_032011231.1	DNA polymerase III subunit delta'	-
FRD49_RS10190 (FRD49_10190)	kdsB	2148256..2149017 (-)	762	WP_004709120.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32650.21 Da
• Isoelectric Point: 9.9423

>NTDB_id=380040 FRD49_RS10155 WP_032011228.1 2143673..2144542(-) (xcpW) [Acinetobacter nosocomialis strain J1A]
MIKNKNFRIQSIASHLRAQSGVIPTDYSGHSSSSYAQTKLRFREPHTRNMVSRLAARSGGVSTGYSEHSSSSCARTKLRF
VNPRSGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQILRDSLQIIPLSANQGGQLHPALE
IDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNNEQPLSSTLLSQVDQYQIMILTPQEVTKWP
EVNIDPTKPNELKKLPKGIKIQLTVAGVSYEWIYSLNQSNLSLSPQGGS

Nucleotide

• Length: 870 bp

>NTDB_id=380040 FRD49_RS10155 WP_032011228.1 2143673..2144542(-) (xcpW) [Acinetobacter nosocomialis strain J1A]
ATGATAAAAAATAAGAATTTTCGAATTCAAAGCATTGCTTCTCATCTTAGAGCTCAGTCGGGTGTTATTCCGACTGACTA
CTCTGGGCATAGCTCTTCGTCTTACGCTCAGACAAAGCTTCGCTTTAGAGAGCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCAGGTGGTGTGTCGACTGGCTATTCAGAGCATAGCTCTTCATCTTGCGCTCGGACAAAGCTTCGCTTT
GTTAATCCTCGCTCAGGATTTACGTTGGTTGAATTGTTAGTTGCGATTGCTATCTTTGCGGTCTTATCTTTATTGGGGTG
GAAAATTTTCGATTACTTGCTTAAAGTTCGTGACCGTAATGCTGAACATGAAGTGCATTTGTTTGAGTTACAAGACGCTT
ATCAACAAATTCTTCGTGATAGTCTGCAAATTATTCCTTTATCTGCAAATCAAGGAGGCCAACTTCATCCAGCTTTAGAA
ATTGATAATCAAATTCTGCGTTTTAGCAAAGCAGGTGTAACGGATCCTTTAAAACAAGGTTTATCACCGTTTGAACGAAT
TGAATATCGTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAATAATGAGCAAC
CTTTATCGAGTACCTTGCTAAGTCAGGTTGACCAATATCAGATTATGATTTTGACTCCGCAAGAGGTAACAAAGTGGCCT
GAGGTTAATATTGATCCAACAAAGCCTAATGAATTGAAAAAATTACCGAAAGGAATAAAAATTCAACTTACTGTAGCAGG
AGTAAGTTATGAATGGATCTATAGCTTAAATCAAAGTAATTTATCGCTTTCCCCACAAGGTGGCTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (83-105)

• Type II secretion system (T2SS), protein J (T2SSJ) (139-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	85.246	84.429	0.72