Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   FRD49_RS03510 Genome accession   NZ_CP042994
Coordinates   725572..730095 (+) Length   1507 a.a.
NCBI ID   WP_032010080.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain J1A     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 720572..735095
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FRD49_RS03485 (FRD49_03485) - 721009..721647 (-) 639 WP_032010079.1 hypothetical protein -
  FRD49_RS03490 (FRD49_03490) pilG 721930..722313 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  FRD49_RS03495 (FRD49_03495) - 722340..722702 (+) 363 WP_002051151.1 PleD family two-component system response regulator -
  FRD49_RS03500 (FRD49_03500) - 722760..723296 (+) 537 WP_002051357.1 chemotaxis protein CheW -
  FRD49_RS03505 (FRD49_03505) - 723343..725424 (+) 2082 WP_004885376.1 methyl-accepting chemotaxis protein -
  FRD49_RS03510 (FRD49_03510) chpA 725572..730095 (+) 4524 WP_032010080.1 hybrid sensor histidine kinase/response regulator Regulator
  FRD49_RS03515 (FRD49_03515) - 730092..730559 (+) 468 WP_002051358.1 hypothetical protein -
  FRD49_RS03520 (FRD49_03520) dapE 730809..731942 (-) 1134 WP_032010083.1 succinyl-diaminopimelate desuccinylase -
  FRD49_RS03525 (FRD49_03525) - 732068..732211 (-) 144 WP_002051109.1 entericidin A/B family lipoprotein -
  FRD49_RS03530 (FRD49_03530) - 732324..733217 (-) 894 WP_032010084.1 DUF1853 family protein -
  FRD49_RS03535 (FRD49_03535) - 733322..733690 (+) 369 WP_032010085.1 YbaN family protein -
  FRD49_RS03540 (FRD49_03540) elsL 733840..734343 (+) 504 WP_032010087.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1507 a.a.        Molecular weight: 171538.10 Da        Isoelectric Point: 4.3443

>NTDB_id=380036 FRD49_RS03510 WP_032010080.1 725572..730095(+) (chpA) [Acinetobacter nosocomialis strain J1A]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFVEEIEEIFVDLQPLLNEWMQSENTATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQTLKLTPAIQSYVQLVFKFYFLKLVDNFKQKRAHAVDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETMTGLELDYIEQNSLAEPIVEDVDTEIAINLDETLTLFMEEAEEHLTTIHQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSNSDEILLLQEYREFIRDSLELLSKHSSNEQLEARLQQFNQSWDAYVEQ
HGDRTDPLTPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYDV
LLDKPLLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSVHNDLSQQDPASVEPLLNIEP
EPEAAVTVENLSDSADWAVLSQSVQQDRQYISSTQVNQNFDPDLLDIFLEEADELLEGIDTDLNIWVGEQENFAALNNLM
RYLHTLKGGANMVQATYLGSITHELESIYERLIQKQLVATSPLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRA
GQNSNFQPVPMVEVFDSESEIFSEQELISEVLIDEIPAEIEPILAELEVHNDQLVFDNVVTELATPVEAITSVTSQENEA
VVEEQDITAVVEQTFLEEAAELLEMADGLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGLEAVYAIAYQLENTFEQFA
LHHFNSNIYDHLLESAIAWLKDAIFKHNYQHFDGLQQSLENIQFFETNIQIPAKLTKTDLFSSEPVMTFIQGDGTEPPPM
MGAWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELETQIIAK
HGIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSHKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLL
PRLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRAQRQKVNKPEAGRIELNIQRQGTD
VVVVFSDDGQGIDVEKVRQKALLAGLIKPEQDLEEQDILQLIFHPGLSTAEQITQISGRGVGLDVVQSDIKALGGHVSVD
SVYGKGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFESPKELFEYENKRYPLRYLSEFVGNQ
PMPRLNGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQS
TPRHKQLNEAVYRQRESDERRLVMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGF
EVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4524 bp        

>NTDB_id=380036 FRD49_RS03510 WP_032010080.1 725572..730095(+) (chpA) [Acinetobacter nosocomialis strain J1A]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAAATCTTCGTTGAAGAAATTGAAGAAATTTTTGTTGATTTGCAACCATTATTAAATGAATGGATGCAGTCTGAGAATA
CTGCTACGCTCACTGAAATTCGCCGCCATTTCCACACTTTAAAAGGTTCTGGAAGAATGATCGGTGCTAAATCTTCAGCT
GAGCTTGCTTGGACAGTTGAAGACACGCTTAATCGCGTAATCAATCAAACCCTTAAATTGACTCCAGCAATCCAGAGCTA
TGTTCAATTAGTATTTAAGTTCTATTTTCTTAAATTAGTAGATAACTTTAAGCAAAAAAGAGCACATGCAGTAGATTTTC
GACCGCTTATTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTACTGCCGAAACAATGACTGGGCTTGAGCTAGACTATATTGAGCAAAACTCATTGGCTGAGCCAATTGTTGA
AGATGTAGATACTGAAATTGCAATAAATCTAGATGAAACTTTGACCTTGTTTATGGAAGAGGCAGAGGAGCATTTAACTA
CAATTCATCAGTTCTTAAATCAAGAGCTGCATCAGTATGATAGTTATAATGCCTTAATACGCGCGCTACATACTTTGCGT
GGCAGTTCTGCGATGGCACAGGTCGAAACAATTTTTGAAGCCAGTACCAAAGTTGAGCACTTATTTAAAATACTGTTGCA
AGAAGAACTTTCTTCTAACTCAGATGAAATTTTATTATTACAAGAATATCGTGAGTTTATTAGAGATAGCTTAGAGCTTC
TATCTAAACATAGTTCAAATGAACAGCTTGAAGCTCGATTGCAGCAGTTTAATCAATCATGGGATGCTTACGTTGAGCAA
CATGGTGACCGAACAGATCCATTAACACCTTCTCATGGTTTGGTATCACAACTATTGTTGTTAGATGTCTCTGAATTGTT
AGATGCAGAATTAGATTTTGAGAAAGGAATTCGTAATGAGTTTCCAGATTATCTTGAACGTCTAAGTGAACAAGCTGATC
TACTGTTACAACATACACATTCTCAAGCAATGCTGGGTTTACATGAATATACCAGTCAATTGAAAGAAAGTTATGATGTA
TTACTTGATAAACCTCTATTATTGCAATCAGACTATATATTTGAAATTTATCAAAAAGCGCATCAACAGCTTATTCAATT
GTTCGATGCCTTGGCTGCTGGTCAGCGAGTTGGTATTGTTAAGCAACATCAAAGTATTCTAGAAGAATTAAAACTTTATA
CCCTACATACTCCGAGCGTACACAATGACCTGTCTCAGCAAGATCCTGCTTCTGTTGAGCCACTACTTAATATCGAACCA
GAGCCAGAAGCTGCTGTTACGGTAGAGAATTTATCAGACTCTGCAGACTGGGCAGTATTAAGCCAGAGTGTACAGCAAGA
TCGCCAATATATTTCCTCTACACAGGTAAATCAAAACTTTGATCCTGACCTTTTAGATATCTTTCTTGAAGAAGCTGATG
AGCTACTTGAGGGAATTGATACCGATCTCAATATTTGGGTAGGTGAGCAAGAAAACTTTGCAGCCCTGAATAATCTAATG
CGCTATTTGCATACCTTGAAAGGTGGAGCAAATATGGTTCAGGCGACTTATCTTGGTTCGATTACCCATGAATTAGAAAG
CATATATGAGCGTTTAATTCAAAAGCAGTTAGTTGCAACTTCACCGTTAATTGATTTTATCCGTTTAGTACAAGATGACT
TGGCTGACCGACTGCAAATCATGCGTGAACAACAATTAGATTATGCAGCTCCTTACACAATTAATGCGTTAAAACGAGCA
GGTCAAAACTCTAACTTCCAACCTGTACCAATGGTTGAAGTATTTGATAGTGAAAGTGAGATCTTCTCTGAACAAGAGCT
GATATCTGAAGTATTAATCGATGAAATACCGGCAGAAATTGAGCCTATTCTTGCAGAATTAGAAGTTCACAATGATCAGC
TGGTATTTGATAACGTTGTTACTGAGTTAGCTACGCCAGTTGAAGCAATAACATCCGTTACATCACAAGAGAATGAAGCG
GTAGTTGAAGAACAGGATATTACGGCTGTTGTTGAGCAGACATTCCTAGAAGAAGCTGCTGAATTGTTAGAAATGGCTGA
TGGGCTATTGAAACAATGGTTTGAGCAGCGTACAAACCGTAGTATCTTGCTTCAATTACAAAGAGCTGTGCACAGTTTGA
AGGGTGGTGCACGAATGGTCGGTTTAGAAGCCGTCTACGCGATTGCCTATCAACTCGAAAATACATTCGAACAATTTGCG
TTGCATCACTTCAACTCGAATATTTATGACCATTTGCTCGAAAGTGCAATTGCATGGCTAAAAGATGCTATTTTCAAGCA
TAACTATCAGCATTTCGATGGATTACAACAAAGTTTAGAAAATATTCAATTCTTTGAAACGAATATCCAAATTCCGGCTA
AGTTAACGAAAACTGATTTGTTTAGCTCAGAACCTGTGATGACTTTCATACAAGGTGATGGTACAGAACCACCACCAATG
ATGGGCGCATGGGAGCAAACAGAACGTCTGGATCAGAACAATGAAATGATCCGTGTTTCAGCAGACTTGATCGAGAAGAT
GATTGACTTGTCTGGTGAGAACTCGATTAACCGTTCACGAATTGAAATGGACTTGAGTCAGTTCGGTCATACATTGGTTG
AAATGGAATTGGCTATTCAACGACTGGCCGATCAGTTACGACGAATGGAAGGCGAGTTAGAAACACAAATTATTGCTAAA
CACGGTATTGAGCATTCTCGCTATACCGACTTTGACCCTTTAGAGATGGACCAATATTCATCTTTAAACCAGTTATCGAA
ATCTCTTGCTGAATCTGCATCGGACTTGGTCGACTTTAAAAATACGTTATCTCACAAGATCAGAGATACAGAAAGTTTAC
TTTTACAACAGTCGCGTATCCAGGCAGAAATTCAAGAAGGCTTGATGCGAACACGATTGGTTCCATTTTCACGTTTGTTA
CCGCGTTTGCAGCGGATTGTGCGTCAAACATCTACAGCCTTGAATAGACCTGCTGAGCTTTTCGTAAATAATACCGAAGG
TGAGTTAGACCGTAACATTTTAGAACGCTTAGTGACACCACTCGAGCATATGCTCAGAAATGCGATTGACCATGGTCTAG
AAGACCGGGCACAGCGCCAAAAGGTGAATAAACCGGAAGCAGGGCGTATTGAACTGAACATTCAGCGTCAAGGAACAGAC
GTTGTTGTTGTCTTTAGCGATGATGGACAAGGTATTGATGTTGAAAAAGTGCGCCAAAAAGCACTGCTTGCTGGTCTGAT
CAAGCCAGAACAAGATTTAGAAGAGCAAGATATTCTACAGCTAATTTTCCATCCAGGTTTAAGTACCGCAGAACAGATTA
CTCAGATTTCTGGACGTGGTGTTGGTCTTGATGTCGTACAGAGCGATATTAAAGCTTTAGGTGGACATGTTAGCGTTGAC
TCTGTTTATGGTAAGGGAACAACATTTACGATACGTGTACCGACTACTGTAGCTGTAAGTGATGCCTTAATGGTAAAAGT
GGCAGATCAGCAATTTGCAATTCCACTTGCTCAAATCGATCGAATTGTTCGAGTTTCGCCAGCTTCTTTAGAGCAGTATT
TTGAAAGCCCTAAAGAACTATTTGAATATGAAAATAAGCGATATCCCTTACGTTATCTTTCTGAATTTGTTGGTAATCAA
CCAATGCCACGACTAAATGGCATGATGTATTCATTACCTGTCTTAATGATTAAAGCCAACAATGGTCAAACTGTGGCGTT
ACTTGTCGATCAGTTAATTGGTTCTCGAGCTCAAATTGTAGTGAAACCAATTGGTCAACAGTTCTCTAGCATTGGGGCAA
TTGCAGGCGCCACGATTTTAGGTGATGGACAGGTTTGTTTAATTTTAGACGGGCAAAATATTGCGCGACAAATTCAGTCT
ACACCGCGTCATAAACAGCTCAATGAAGCAGTATATAGACAACGTGAATCAGACGAGCGCCGTCTCGTTATGATTGTCGA
TGACTCCGTAACTGTACGTAAGGTAACGTCTCGATTACTTGAACGCCAAGGCTACGATGTTGTTACGGCTAAAGATGGCG
TTGATGCCATAGAACAGCTAGAAAATATTAAGCCAGATTTGATGCTGCTTGATATTGAAATGCCACGTATGGATGGTTTC
GAAGTACTTAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCAGAACAGGCGAAAA
ACATCGTGAACGGGCATTCTCGTTAGGTGTAAGTCAATATATGGGTAAACCGTTCCAAGAAGAAGAGTTACTAGAAAATA
TTGATGCTTTACTTGTAGCGTTTGAAAGCGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

92.9

100

0.929


Multiple sequence alignment