Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | FVF62_RS06410 | Genome accession | NZ_CP042931 |
| Coordinates | 1344253..1344735 (+) | Length | 160 a.a. |
| NCBI ID | WP_001046420.1 | Uniprot ID | A0A7U3Y2Y6 |
| Organism | Acinetobacter baumannii strain ABCR01 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1339253..1349735
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FVF62_RS06400 (FVF62_06480) | - | 1339557..1340374 (+) | 818 | Protein_1232 | PilX N-terminal domain-containing pilus assembly protein | - |
| FVF62_RS06405 (FVF62_06485) | pilY1 | 1340386..1344240 (+) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| FVF62_RS06410 (FVF62_06490) | pilY2 | 1344253..1344735 (+) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| FVF62_RS06415 (FVF62_06495) | pilE | 1344732..1345157 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| FVF62_RS06420 (FVF62_06500) | rpsP | 1345304..1345555 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| FVF62_RS06425 (FVF62_06505) | rimM | 1345575..1346123 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| FVF62_RS06430 (FVF62_06510) | trmD | 1346169..1346909 (+) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| FVF62_RS06435 (FVF62_06515) | rplS | 1347118..1347486 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| FVF62_RS06440 (FVF62_06520) | - | 1347539..1348480 (-) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| FVF62_RS06445 (FVF62_06525) | - | 1348595..1349629 (-) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17548.77 Da Isoelectric Point: 8.4817
>NTDB_id=379510 FVF62_RS06410 WP_001046420.1 1344253..1344735(+) (pilY2) [Acinetobacter baumannii strain ABCR01]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=379510 FVF62_RS06410 WP_001046420.1 1344253..1344735(+) (pilY2) [Acinetobacter baumannii strain ABCR01]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
97.5 |
100 |
0.975 |
| comE | Acinetobacter baylyi ADP1 |
40.116 |
100 |
0.431 |