Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   FTX43_RS09525 Genome accession   NZ_CP042839
Coordinates   1780599..1781867 (+) Length   422 a.a.
NCBI ID   WP_147607025.1    Uniprot ID   -
Organism   Enterococcus sp. DA9     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1775599..1786867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FTX43_RS09500 tsf 1776335..1777216 (+) 882 WP_002293878.1 translation elongation factor Ts -
  FTX43_RS09505 pyrH 1777352..1778074 (+) 723 WP_002293877.1 UMP kinase -
  FTX43_RS09510 frr 1778077..1778634 (+) 558 WP_002293875.1 ribosome recycling factor -
  FTX43_RS09515 - 1778829..1779641 (+) 813 WP_002308897.1 isoprenyl transferase -
  FTX43_RS09520 - 1779638..1780438 (+) 801 WP_002308898.1 phosphatidate cytidylyltransferase -
  FTX43_RS09525 eeP 1780599..1781867 (+) 1269 WP_147607025.1 RIP metalloprotease RseP Regulator
  FTX43_RS09530 - 1781935..1783644 (+) 1710 WP_002308900.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46079.57 Da        Isoelectric Point: 4.8405

>NTDB_id=378843 FTX43_RS09525 WP_147607025.1 1780599..1781867(+) (eeP) [Enterococcus sp. DA9]
MKTILTFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINLSKKIQLTNAIPMELSRYDLEDELTITGYVNGDETEVVTYPVDHDATIIETDGTEIRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILAIVLFIILAFMQGGVQVTNTNRVGEIIPNGAAAEAGLKENDKVVSVDGKEIHTWN
DLTTVITKNPGKTLDFEIEREGKMQSVDVTPKSVESNGEKVGQLGMQAPMNTGFMDKIIGGTRQAFSGSLEIFKALGSLF
TGFSLDKLGGPVMMYQLSSEAANQGVTTVIGLMALLSMNLGIVNLLPIPALDGGKLVLNIFEGIRGKPLSQEKEGILTLA
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=378843 FTX43_RS09525 WP_147607025.1 1780599..1781867(+) (eeP) [Enterococcus sp. DA9]
ATGAAAACGATACTAACATTTATCATTGTTTTTGGTATATTAGTGATTGTTCATGAGTTTGGTCATTTCTTCTTTGCGAA
ACGATCAGGAATCCTCGTTCGCGAATTTGCTATCGGTATGGGTCCGAAAATTTATGGGCATCAAGCAAAAGACGGGACAA
CATATACGCTTCGCCTATTACCTATTGGCGGTTATGTTCGAATGGCAGGCAATGGGGATGATGAAACAGAAATGGCACCA
GGTATGCCTCTTTCTCTTTTACTAAATTCTGACGGCATCGTAGAGAAGATAAATTTAAGTAAGAAAATCCAATTGACAAA
TGCTATCCCAATGGAATTGAGCCGTTATGATTTAGAAGATGAGCTGACTATCACTGGTTATGTGAATGGAGATGAAACAG
AAGTAGTGACCTATCCTGTCGATCACGATGCGACGATTATTGAAACCGACGGAACAGAAATCAGAATTGCACCAAAAGAT
GTACAGTTCCAATCGGCTAAACTGTGGCAGCGTATGCTGACCAATTTTGCCGGTCCAATGAATAACTTTATCTTGGCAAT
CGTGTTATTTATTATTCTTGCATTCATGCAAGGCGGTGTTCAAGTGACAAATACTAATCGTGTAGGAGAGATTATCCCTA
ATGGTGCTGCGGCAGAAGCAGGCTTAAAAGAAAATGATAAGGTAGTTAGCGTGGACGGTAAAGAAATCCACACTTGGAAC
GATTTGACAACAGTCATCACGAAAAATCCAGGTAAAACATTAGATTTTGAGATCGAACGAGAAGGTAAGATGCAATCTGT
CGACGTGACACCGAAATCTGTAGAGTCAAATGGCGAAAAGGTTGGCCAACTTGGCATGCAAGCCCCAATGAATACAGGTT
TTATGGATAAGATCATCGGCGGAACACGTCAAGCTTTTAGCGGTTCATTGGAAATTTTCAAAGCCTTAGGATCACTGTTT
ACAGGTTTTAGTTTAGATAAATTAGGCGGACCTGTTATGATGTACCAATTATCTTCAGAAGCAGCAAACCAAGGTGTAAC
AACTGTTATTGGTTTGATGGCGCTTCTTTCAATGAACCTTGGAATCGTCAATCTGCTTCCGATCCCTGCCTTAGATGGTG
GGAAATTAGTGTTGAATATTTTTGAAGGGATTCGTGGGAAACCATTAAGTCAAGAAAAAGAAGGAATATTGACATTAGCT
GGCTTTGGATTTTTAATGTTGTTGATGGTGCTAGTTACATGGAACGATATTCAACGATTCTTTTTCTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-408)

PDZ domain (PDZ_2)

(199-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

53.972

100

0.547
  eeP Streptococcus thermophilus LMG 18311

53.738

100

0.545

Multiple sequence alignment