Detailed information NTG0378108

Bioinformatically predicted

Overview

• Name: recQ
• Type: Machinery gene
• Locus tag: HBL79_RS11085
• Genome accession: NZ_CP050316
• Coordinates: 2284177..2286021 (-)
• Length: 614 a.a.
• NCBI ID: WP_035689220.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain ESV-135
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2279177..2291021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HBL79_RS11065 (HBL79_11065)	gpt	2280751..2281215 (+)	465	WP_035689227.1	xanthine phosphoribosyltransferase	-
HBL79_RS11070 (HBL79_11070)	-	2281267..2282091 (+)	825	WP_035689225.1	alpha/beta hydrolase	-
HBL79_RS11075 (HBL79_11075)	-	2282143..2282898 (-)	756	WP_035689223.1	esterase family protein	-
HBL79_RS11080 (HBL79_11080)	-	2282907..2284085 (-)	1179	WP_035689222.1	ATP-grasp domain-containing protein	-
HBL79_RS11085 (HBL79_11085)	recQ	2284177..2286021 (-)	1845	WP_035689220.1	DNA helicase RecQ	Machinery gene
HBL79_RS11090 (HBL79_11090)	cyaY	2286084..2286392 (-)	309	WP_017806692.1	iron donor protein CyaY	-
HBL79_RS12530	lptM	2286540..2286659 (+)	120	WP_035689218.1	LPS translocon maturation chaperone LptM	-
HBL79_RS11095 (HBL79_11095)	lysA	2286670..2287920 (+)	1251	WP_035689216.1	diaminopimelate decarboxylase	-
HBL79_RS11100 (HBL79_11100)	-	2288075..2288488 (+)	414	WP_035689214.1	hypothetical protein	-

Sequence

Protein

• Length: 614 a.a.
• Molecular weight: 69783.07 Da
• Isoelectric Point: 8.5034

>NTDB_id=378108 HBL79_RS11085 WP_035689220.1 2284177..2286021(-) (recQ) [Avibacterium paragallinarum strain ESV-135]
MEKNTALKVLNEVFGYQSFRNGQEEVINAALSHQDSLVIMATGNGKSLCYQIPALCFPGLTLVISPLISLMKDQVDQLLA
NGIEVDYLNSTQTFEQQQIVQNKAISGQLKLLYISPEKAMTTSFFQFISHCQVSFIAIDEAHCISQWGHDFRPEYTQLGG
LKRCFPNAPIMALTATADSATRQDILHHLQLDNPHIYIGSFDRPNIRYTLVEKFKPMEQLCQFVLGQKGKSGIVYCNSRN
KVERLAESLRKKGVAAQAYHAGMEASQREQVQRAFQRDNVQVVVATVAFGMGINKSNVRFVAHFDLPRSIEAYYQETGRA
GRDDLPAEAVLFYEPADYAWLQKMLLEKPESPQRQIEQHKLEAIGEFAESQTCRRLVLLNYFGEHRQAPCKNCDICLDPP
KKYDGLIDAQKVMSTIYRVGQMFGVHYVIGVLRGMQNQKIKDNQHDQLSVYGIGKDKSKEYWQSVIRQLIHLGLVQQVMN
QFHSVLQLTENARPILRGEQPLELAMPRVSSIMTAQSAQKSAVQNYDKDLFARLRFLRKQIADKENIPPYIVFNDATLQE
MAQYQPTNKREMLQINGVGATKLERFGQAFLHIIQEHKSLSTKNSQPLKLSNEK

Nucleotide

• Length: 1845 bp

>NTDB_id=378108 HBL79_RS11085 WP_035689220.1 2284177..2286021(-) (recQ) [Avibacterium paragallinarum strain ESV-135]
ATGGAAAAAAACACCGCACTTAAGGTTCTGAACGAGGTTTTTGGTTACCAATCTTTCCGCAATGGACAAGAAGAAGTGAT
CAACGCCGCCCTTTCACACCAAGATAGCCTTGTGATTATGGCAACGGGAAACGGAAAATCCCTTTGCTATCAAATTCCTG
CGCTTTGCTTTCCGGGGCTAACCTTAGTCATTTCACCGCTGATTTCCTTAATGAAAGATCAAGTGGATCAACTGCTTGCT
AACGGTATTGAAGTGGATTATCTCAATTCCACACAAACCTTTGAGCAGCAGCAAATTGTACAAAATAAGGCGATTTCAGG
GCAGCTCAAATTGCTTTATATTTCGCCCGAAAAGGCGATGACAACCAGTTTTTTCCAATTTATTTCTCATTGCCAAGTGA
GTTTTATTGCCATTGATGAAGCTCATTGTATTTCCCAATGGGGACACGATTTCCGCCCTGAATACACCCAACTTGGCGGC
TTAAAACGTTGCTTTCCAAATGCGCCGATAATGGCGCTCACAGCCACCGCAGACAGTGCCACAAGGCAAGATATTTTGCA
CCATTTGCAACTGGATAATCCGCATATTTATATCGGCAGCTTTGATCGCCCAAATATTCGCTACACTTTGGTGGAAAAAT
TTAAGCCAATGGAGCAGCTATGCCAATTTGTGCTAGGGCAGAAAGGCAAAAGTGGTATCGTTTATTGCAACAGCCGTAAC
AAAGTGGAACGCTTGGCGGAAAGCTTGCGCAAAAAAGGCGTGGCAGCACAAGCCTATCACGCAGGAATGGAGGCCAGCCA
GCGCGAGCAAGTTCAGCGTGCCTTTCAGCGTGATAATGTGCAAGTGGTGGTGGCAACCGTTGCTTTTGGAATGGGCATTA
ACAAATCCAACGTGCGATTTGTCGCCCATTTTGATTTGCCACGCAGTATTGAGGCGTATTACCAAGAAACAGGGCGCGCA
GGGCGTGATGATTTGCCTGCTGAAGCGGTGCTGTTTTACGAACCCGCCGATTATGCGTGGTTACAAAAAATGCTGCTGGA
AAAACCAGAAAGCCCGCAGCGCCAAATTGAACAGCATAAATTAGAAGCCATCGGCGAATTTGCCGAAAGTCAAACTTGCC
GCCGTTTAGTTTTGCTGAATTATTTTGGCGAACATCGCCAAGCGCCGTGCAAAAACTGCGATATTTGCCTTGATCCGCCG
AAAAAATATGACGGCTTAATTGATGCGCAAAAAGTGATGTCCACCATTTATCGTGTAGGGCAAATGTTTGGCGTGCATTA
TGTGATCGGCGTGCTGCGCGGAATGCAAAATCAAAAAATTAAAGATAACCAGCACGATCAGCTCAGCGTGTACGGCATTG
GCAAAGACAAAAGCAAAGAATATTGGCAATCGGTGATCCGCCAGCTGATTCATCTTGGGTTGGTGCAACAAGTGATGAAT
CAATTTCATTCGGTGTTACAACTGACGGAAAATGCGCGCCCAATTTTGCGTGGCGAACAGCCTTTAGAGCTGGCAATGCC
AAGGGTTTCTTCCATTATGACCGCACAAAGCGCACAAAAAAGTGCGGTGCAAAATTATGACAAAGATCTCTTTGCTCGCC
TGCGTTTCTTACGCAAACAAATTGCCGACAAAGAAAATATCCCCCCTTATATTGTGTTCAACGATGCCACTTTGCAAGAA
ATGGCACAATATCAACCCACCAACAAGCGCGAAATGCTACAAATCAACGGCGTGGGCGCAACCAAATTAGAGCGCTTTGG
ACAGGCATTCCTGCATATTATCCAAGAGCATAAATCACTCAGCACAAAAAACAGCCAACCGCTTAAATTGTCTAACGAAA
AATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (218-322)

• DEAD/DEAH box helicase (DEAD) (22-179)

• HRDC domain (HRDC) (528-594)

• RecQ zinc-binding (RecQ_Zn_bind) (336-397)

• RQC domain (RQC) (399-509)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recQ	Bacillus subtilis subsp. subtilis str. 168	39.566	97.557	0.386