Detailed information NTG0378045

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: HB750_RS09445
• Genome accession: NZ_CP050273
• Coordinates: 1927131..1928222 (-)
• Length: 363 a.a.
• NCBI ID: WP_002275016.1
• Uniprot ID: -
• Organism: Streptococcus mutans strain P1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1922131..1933222

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HB750_RS09430 (HB750_09430)	-	1922256..1923875 (-)	1620	WP_002282070.1	ATP-binding cassette domain-containing protein	-
HB750_RS09435 (HB750_09435)	trpS	1924308..1925330 (+)	1023	WP_002264241.1	tryptophan--tRNA ligase	-
HB750_RS09440 (HB750_09440)	guaB	1925487..1926968 (+)	1482	WP_019804949.1	IMP dehydrogenase	-
HB750_RS09445 (HB750_09445)	recF	1927131..1928222 (-)	1092	WP_002275016.1	DNA replication/repair protein RecF	Machinery gene
HB750_RS09450 (HB750_09450)	yaaA	1928225..1928590 (-)	366	WP_002262455.1	S4 domain-containing protein YaaA	-
HB750_RS09455 (HB750_09455)	yfmF	1928669..1929916 (+)	1248	WP_019804948.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
HB750_RS09460 (HB750_09460)	yfmH	1929918..1931210 (+)	1293	WP_002283542.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
HB750_RS09465 (HB750_09465)	-	1931283..1932260 (+)	978	WP_019314979.1	helix-turn-helix domain-containing protein	-
HB750_RS09470 (HB750_09470)	pgsA	1932272..1932814 (+)	543	WP_002262451.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 363 a.a.
• Molecular weight: 42015.26 Da
• Isoelectric Point: 9.8334

>NTDB_id=378045 HB750_RS09445 WP_002275016.1 1927131..1928222(-) (recF) [Streptococcus mutans strain P1]
MWIEKINLKHYRNYTAIESEFSQSLNVFVGQNAQGKTNFLEAIYFLSLTRSHRTRSDKELIQFGQKELNVSGLLNRVNGK
IPLEINLSNKGRTTKINYLKQPKLSDYIGTMTVVLFAPEDLQLIKGSPSLRRKFIDIDLGQIKPIYLSDLSNYNHVLKQR
NAYLKSEKKVDTDFLFVLDEQLVDYGSKVIEHRLDFIQNLTKEADKYHFSISNQQEHLKISYLSSVKFDHKKNIRDNFLN
LLQKNRQGDIFKKNTSVGPHRDDLAFFINQMNASFGSQGQHRSLILSLKLAEIELIKTVTGDYPILLLDDVMSELDNYRQ
IKLLEGIKDNVQTFITTTSLEHLQQLPKKLKLFTINQGKVLSE

Nucleotide

• Length: 1092 bp

>NTDB_id=378045 HB750_RS09445 WP_002275016.1 1927131..1928222(-) (recF) [Streptococcus mutans strain P1]
ATGTGGATAGAAAAAATTAATTTAAAACATTATCGCAATTATACAGCCATTGAATCTGAATTTTCCCAAAGTCTTAATGT
TTTTGTGGGACAAAATGCTCAAGGAAAAACCAATTTCCTAGAGGCTATTTATTTTTTATCTTTAACCCGCAGTCATCGAA
CACGATCTGACAAAGAACTTATTCAATTTGGTCAAAAAGAATTAAATGTTTCTGGCCTTCTTAATCGTGTCAATGGCAAA
ATTCCTCTGGAAATCAACTTATCTAATAAAGGCCGAACAACAAAAATAAATTATCTCAAACAACCTAAACTTTCAGACTA
TATTGGAACAATGACTGTTGTTCTCTTTGCTCCAGAAGATCTTCAACTAATAAAAGGCTCCCCAAGTCTCAGAAGAAAGT
TTATTGACATTGATTTAGGACAAATCAAGCCTATTTACTTATCTGATTTATCAAATTATAATCATGTTCTTAAACAACGA
AATGCCTATTTAAAATCAGAGAAGAAGGTTGATACTGATTTTCTTTTCGTTCTAGATGAACAATTGGTAGATTATGGTAG
TAAGGTTATTGAGCATCGCCTTGATTTTATTCAAAATTTAACTAAAGAAGCTGATAAATATCATTTCTCTATTTCAAATC
AACAGGAACATTTAAAAATTTCCTACCTTTCTTCTGTTAAATTTGATCATAAAAAAAATATTCGTGATAACTTTTTAAAC
CTGCTACAAAAAAATCGGCAGGGTGATATTTTCAAAAAGAACACCAGTGTTGGTCCGCACCGAGATGATTTAGCCTTTTT
CATCAATCAAATGAACGCTAGCTTTGGTAGTCAAGGACAACATCGTAGCCTTATTTTATCTTTAAAGCTGGCTGAGATTG
AACTTATAAAAACAGTCACTGGGGATTATCCTATTCTCTTGTTAGATGATGTCATGAGTGAACTTGATAATTATAGACAA
ATCAAACTTTTAGAAGGCATCAAAGATAATGTTCAGACCTTTATAACAACAACTAGTCTTGAACATCTTCAACAACTCCC
TAAGAAACTAAAGTTATTTACTATCAACCAAGGAAAAGTGCTATCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-357)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65	99.174	0.645
recF	Bacillus subtilis subsp. subtilis str. 168	43.902	100	0.446