Detailed information
Bioinformatically predicted
Overview
| Name | cqsS | Type | Regulator |
| Locus tag | FR741_RS18855 | Genome accession | NZ_CP042452 |
| Coordinates | 804464..806509 (+) | Length | 681 a.a. |
| NCBI ID | WP_006742321.1 | Uniprot ID | - |
| Organism | Vibrio diabolicus strain FA3 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 799464..811509
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FR741_RS18835 (FR741_19535) | dcuC | 799724..801091 (-) | 1368 | WP_005398199.1 | anaerobic C4-dicarboxylate transporter DcuC | - |
| FR741_RS18840 (FR741_19540) | - | 801447..802571 (-) | 1125 | WP_005398197.1 | fatty acid desaturase | - |
| FR741_RS18845 (FR741_19545) | - | 802844..803392 (+) | 549 | WP_005398196.1 | GNAT family N-acetyltransferase | - |
| FR741_RS18850 (FR741_19550) | - | 803479..804096 (-) | 618 | WP_074190595.1 | HAD family phosphatase | - |
| FR741_RS18855 (FR741_19555) | cqsS | 804464..806509 (+) | 2046 | WP_006742321.1 | response regulator | Regulator |
| FR741_RS18860 (FR741_19560) | cqsA | 806613..807794 (-) | 1182 | WP_167427433.1 | alpha-hydroxyketone-type quorum-sensing autoinducer synthase | Regulator |
| FR741_RS18865 (FR741_19565) | ylqF | 808135..809079 (-) | 945 | WP_005395264.1 | ribosome biogenesis GTPase YlqF | - |
| FR741_RS18870 (FR741_19570) | - | 809758..810912 (+) | 1155 | WP_167427434.1 | EAL domain-containing protein | - |
| FR741_RS18875 | - | 810917..811066 (+) | 150 | WP_048624969.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 681 a.a. Molecular weight: 78038.49 Da Isoelectric Point: 5.3911
>NTDB_id=378014 FR741_RS18855 WP_006742321.1 804464..806509(+) (cqsS) [Vibrio diabolicus strain FA3]
MDSIRKVYQYAEPNLTLVGWMGFLGFPLYYFVWDFVFPQAYENLPLRLFCSLLFFGIIFRNRLSSTWRKYIHIYYQVTIT
ICLPFFFFYMLLMNDWSNVWVMSFMSAIFLHILLVHVTRVMFAQTFAGIGLATFFAWVAKGFHLDLTMDWTHVPIFLFIY
VFGNLFYFRNQVEHEAKVSLAKSFGAGIAHEMRNPLSGLCTSIDVIQSVLPSKKEAEKDQYLMSGEDVTLLREVSEDAMN
IIQSGNETIDLLLTSIDENRVSRSSFQKHSAHSVVEKAIESFSYKRATDRFAISLDARSEFDFLGSDTLLKYVMYNLFKN
AFHHRTSEDFHIHVSMTSTEHSNQIVVTDNGAGIAPDVLRNIFQDFYTTGKSGSYGLGLPFCKKVMRSFGGNIECQSQLG
EWSQFTLTFPPITSDIVTEIKNDLTKLKTILTVTNQDILVSKVTDISRFMGFESTILDVNQVLKKKEYEFEFDLIFIDLE
SLDARANQLDRLESLLSFTEARIVYLFEHHPTQRACKAAYEPIWVETQAWLLNTKPTIDRLLYDSSYVSTPTASVALDTS
NKRTIMVVDDNESLRKFTAMLLEKQGFEVIQKEDGQQALDTLEQENVDLILMDIEMPIMDGVEASRRIRSSDKNYASVPI
IAHTGDSSPVTLDKIGSSGMSDFIVKPADKNRLFDKIANWI
MDSIRKVYQYAEPNLTLVGWMGFLGFPLYYFVWDFVFPQAYENLPLRLFCSLLFFGIIFRNRLSSTWRKYIHIYYQVTIT
ICLPFFFFYMLLMNDWSNVWVMSFMSAIFLHILLVHVTRVMFAQTFAGIGLATFFAWVAKGFHLDLTMDWTHVPIFLFIY
VFGNLFYFRNQVEHEAKVSLAKSFGAGIAHEMRNPLSGLCTSIDVIQSVLPSKKEAEKDQYLMSGEDVTLLREVSEDAMN
IIQSGNETIDLLLTSIDENRVSRSSFQKHSAHSVVEKAIESFSYKRATDRFAISLDARSEFDFLGSDTLLKYVMYNLFKN
AFHHRTSEDFHIHVSMTSTEHSNQIVVTDNGAGIAPDVLRNIFQDFYTTGKSGSYGLGLPFCKKVMRSFGGNIECQSQLG
EWSQFTLTFPPITSDIVTEIKNDLTKLKTILTVTNQDILVSKVTDISRFMGFESTILDVNQVLKKKEYEFEFDLIFIDLE
SLDARANQLDRLESLLSFTEARIVYLFEHHPTQRACKAAYEPIWVETQAWLLNTKPTIDRLLYDSSYVSTPTASVALDTS
NKRTIMVVDDNESLRKFTAMLLEKQGFEVIQKEDGQQALDTLEQENVDLILMDIEMPIMDGVEASRRIRSSDKNYASVPI
IAHTGDSSPVTLDKIGSSGMSDFIVKPADKNRLFDKIANWI
Nucleotide
Download Length: 2046 bp
>NTDB_id=378014 FR741_RS18855 WP_006742321.1 804464..806509(+) (cqsS) [Vibrio diabolicus strain FA3]
ATGGACTCGATACGTAAGGTTTATCAATATGCAGAACCCAACCTGACTCTCGTTGGTTGGATGGGGTTTCTTGGCTTTCC
GCTGTACTACTTTGTTTGGGATTTTGTTTTCCCACAGGCTTATGAAAACTTGCCGCTCAGACTGTTTTGTTCACTATTGT
TCTTTGGCATCATTTTTAGAAACCGCTTGTCGTCAACGTGGCGAAAATATATCCATATTTACTACCAAGTGACGATAACG
ATCTGCTTACCGTTTTTCTTTTTCTATATGTTATTGATGAATGACTGGTCCAATGTTTGGGTCATGTCCTTTATGTCCGC
GATTTTCTTGCACATTCTATTGGTTCATGTCACAAGAGTTATGTTCGCTCAAACTTTTGCCGGAATAGGTTTAGCGACGT
TCTTTGCTTGGGTAGCGAAAGGGTTTCATCTCGATTTAACAATGGACTGGACGCATGTGCCAATCTTTCTCTTTATTTAT
GTATTTGGCAATTTATTCTACTTTCGGAACCAAGTAGAGCACGAAGCGAAAGTGTCGTTGGCCAAGTCATTCGGGGCCGG
AATTGCGCATGAAATGCGTAACCCTTTAAGTGGCCTTTGTACGTCAATCGATGTTATCCAATCAGTCTTACCCAGTAAAA
AAGAAGCCGAGAAAGACCAATATCTGATGAGCGGAGAGGATGTCACCCTGCTGCGCGAAGTTAGTGAGGATGCGATGAAC
ATCATCCAGTCGGGCAACGAGACGATAGATTTACTTCTGACATCGATAGACGAAAACCGTGTCTCGCGATCCAGTTTCCA
AAAGCATTCTGCTCACTCAGTGGTTGAAAAAGCGATTGAAAGCTTTAGTTATAAGCGTGCGACGGATCGCTTTGCTATAT
CCCTAGATGCGAGAAGTGAGTTTGATTTTCTTGGTAGCGATACCTTACTCAAATACGTTATGTATAACCTTTTCAAGAAC
GCCTTCCATCATCGCACATCTGAAGATTTCCACATACATGTCTCCATGACGAGTACGGAGCACTCAAACCAAATCGTTGT
AACCGATAATGGTGCAGGCATTGCTCCTGATGTCCTACGTAATATATTTCAGGACTTTTACACAACTGGTAAGTCAGGCA
GCTATGGTTTGGGTTTGCCATTTTGTAAAAAAGTGATGCGTTCTTTCGGAGGTAACATTGAATGCCAGTCTCAGCTAGGT
GAGTGGTCTCAGTTCACGTTAACTTTCCCGCCGATCACATCTGATATCGTGACTGAAATTAAAAACGATTTGACCAAACT
CAAAACCATCCTAACGGTGACTAATCAAGATATTCTTGTGTCGAAAGTGACGGACATTAGCCGTTTTATGGGTTTTGAAT
CAACGATCTTAGATGTTAATCAAGTGCTCAAAAAGAAAGAGTATGAGTTCGAATTCGACCTGATTTTTATCGATCTTGAG
AGCTTGGATGCAAGAGCAAACCAATTGGATAGATTAGAATCTCTTTTGTCTTTCACGGAAGCTCGTATCGTTTATCTTTT
TGAGCATCACCCGACACAGAGAGCATGCAAAGCGGCATATGAGCCTATTTGGGTCGAGACTCAAGCCTGGTTATTGAATA
CTAAGCCAACCATTGACCGTCTCTTGTATGATTCAAGCTATGTATCGACACCAACGGCCTCAGTGGCTTTGGATACGTCA
AATAAGCGGACAATTATGGTCGTGGATGATAACGAATCTTTGCGAAAATTTACCGCGATGTTACTCGAAAAGCAGGGCTT
TGAAGTGATTCAGAAAGAAGACGGGCAGCAAGCACTGGATACATTAGAGCAAGAGAACGTTGACCTCATTCTTATGGATA
TCGAGATGCCCATCATGGATGGTGTAGAAGCTTCAAGGCGAATTCGAAGCTCGGATAAAAACTATGCGTCGGTACCTATT
ATTGCGCATACTGGGGATAGCTCACCTGTTACGCTGGACAAAATAGGCTCTTCTGGCATGTCTGACTTTATCGTGAAACC
AGCGGATAAAAATCGCTTATTCGACAAAATCGCAAACTGGATTTAA
ATGGACTCGATACGTAAGGTTTATCAATATGCAGAACCCAACCTGACTCTCGTTGGTTGGATGGGGTTTCTTGGCTTTCC
GCTGTACTACTTTGTTTGGGATTTTGTTTTCCCACAGGCTTATGAAAACTTGCCGCTCAGACTGTTTTGTTCACTATTGT
TCTTTGGCATCATTTTTAGAAACCGCTTGTCGTCAACGTGGCGAAAATATATCCATATTTACTACCAAGTGACGATAACG
ATCTGCTTACCGTTTTTCTTTTTCTATATGTTATTGATGAATGACTGGTCCAATGTTTGGGTCATGTCCTTTATGTCCGC
GATTTTCTTGCACATTCTATTGGTTCATGTCACAAGAGTTATGTTCGCTCAAACTTTTGCCGGAATAGGTTTAGCGACGT
TCTTTGCTTGGGTAGCGAAAGGGTTTCATCTCGATTTAACAATGGACTGGACGCATGTGCCAATCTTTCTCTTTATTTAT
GTATTTGGCAATTTATTCTACTTTCGGAACCAAGTAGAGCACGAAGCGAAAGTGTCGTTGGCCAAGTCATTCGGGGCCGG
AATTGCGCATGAAATGCGTAACCCTTTAAGTGGCCTTTGTACGTCAATCGATGTTATCCAATCAGTCTTACCCAGTAAAA
AAGAAGCCGAGAAAGACCAATATCTGATGAGCGGAGAGGATGTCACCCTGCTGCGCGAAGTTAGTGAGGATGCGATGAAC
ATCATCCAGTCGGGCAACGAGACGATAGATTTACTTCTGACATCGATAGACGAAAACCGTGTCTCGCGATCCAGTTTCCA
AAAGCATTCTGCTCACTCAGTGGTTGAAAAAGCGATTGAAAGCTTTAGTTATAAGCGTGCGACGGATCGCTTTGCTATAT
CCCTAGATGCGAGAAGTGAGTTTGATTTTCTTGGTAGCGATACCTTACTCAAATACGTTATGTATAACCTTTTCAAGAAC
GCCTTCCATCATCGCACATCTGAAGATTTCCACATACATGTCTCCATGACGAGTACGGAGCACTCAAACCAAATCGTTGT
AACCGATAATGGTGCAGGCATTGCTCCTGATGTCCTACGTAATATATTTCAGGACTTTTACACAACTGGTAAGTCAGGCA
GCTATGGTTTGGGTTTGCCATTTTGTAAAAAAGTGATGCGTTCTTTCGGAGGTAACATTGAATGCCAGTCTCAGCTAGGT
GAGTGGTCTCAGTTCACGTTAACTTTCCCGCCGATCACATCTGATATCGTGACTGAAATTAAAAACGATTTGACCAAACT
CAAAACCATCCTAACGGTGACTAATCAAGATATTCTTGTGTCGAAAGTGACGGACATTAGCCGTTTTATGGGTTTTGAAT
CAACGATCTTAGATGTTAATCAAGTGCTCAAAAAGAAAGAGTATGAGTTCGAATTCGACCTGATTTTTATCGATCTTGAG
AGCTTGGATGCAAGAGCAAACCAATTGGATAGATTAGAATCTCTTTTGTCTTTCACGGAAGCTCGTATCGTTTATCTTTT
TGAGCATCACCCGACACAGAGAGCATGCAAAGCGGCATATGAGCCTATTTGGGTCGAGACTCAAGCCTGGTTATTGAATA
CTAAGCCAACCATTGACCGTCTCTTGTATGATTCAAGCTATGTATCGACACCAACGGCCTCAGTGGCTTTGGATACGTCA
AATAAGCGGACAATTATGGTCGTGGATGATAACGAATCTTTGCGAAAATTTACCGCGATGTTACTCGAAAAGCAGGGCTT
TGAAGTGATTCAGAAAGAAGACGGGCAGCAAGCACTGGATACATTAGAGCAAGAGAACGTTGACCTCATTCTTATGGATA
TCGAGATGCCCATCATGGATGGTGTAGAAGCTTCAAGGCGAATTCGAAGCTCGGATAAAAACTATGCGTCGGTACCTATT
ATTGCGCATACTGGGGATAGCTCACCTGTTACGCTGGACAAAATAGGCTCTTCTGGCATGTCTGACTTTATCGTGAAACC
AGCGGATAAAAATCGCTTATTCGACAAAATCGCAAACTGGATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cqsS | Vibrio cholerae strain A1552 |
49.489 |
100 |
0.498 |