Detailed information NTG0377897

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: HB751_RS08075
• Genome accession: NZ_CP050272
• Coordinates: 1653039..1654130 (-)
• Length: 363 a.a.
• NCBI ID: WP_002275016.1
• Uniprot ID: -
• Organism: Streptococcus mutans strain P6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1648039..1659130

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HB751_RS08060 (HB751_08060)	-	1648164..1649783 (-)	1620	WP_002282070.1	ATP-binding cassette domain-containing protein	-
HB751_RS08065 (HB751_08065)	trpS	1650216..1651238 (+)	1023	WP_002264241.1	tryptophan--tRNA ligase	-
HB751_RS08070 (HB751_08070)	guaB	1651395..1652876 (+)	1482	WP_019804949.1	IMP dehydrogenase	-
HB751_RS08075 (HB751_08075)	recF	1653039..1654130 (-)	1092	WP_002275016.1	DNA replication/repair protein RecF	Machinery gene
HB751_RS08080 (HB751_08080)	yaaA	1654133..1654498 (-)	366	WP_002262455.1	S4 domain-containing protein YaaA	-
HB751_RS08085 (HB751_08085)	yfmF	1654577..1655824 (+)	1248	WP_019804948.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
HB751_RS08090 (HB751_08090)	yfmH	1655826..1657118 (+)	1293	WP_002283542.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
HB751_RS08095 (HB751_08095)	-	1657191..1658168 (+)	978	WP_019314979.1	helix-turn-helix domain-containing protein	-
HB751_RS08100 (HB751_08100)	pgsA	1658180..1658722 (+)	543	WP_002262451.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 363 a.a.
• Molecular weight: 42015.26 Da
• Isoelectric Point: 9.8334

>NTDB_id=377897 HB751_RS08075 WP_002275016.1 1653039..1654130(-) (recF) [Streptococcus mutans strain P6]
MWIEKINLKHYRNYTAIESEFSQSLNVFVGQNAQGKTNFLEAIYFLSLTRSHRTRSDKELIQFGQKELNVSGLLNRVNGK
IPLEINLSNKGRTTKINYLKQPKLSDYIGTMTVVLFAPEDLQLIKGSPSLRRKFIDIDLGQIKPIYLSDLSNYNHVLKQR
NAYLKSEKKVDTDFLFVLDEQLVDYGSKVIEHRLDFIQNLTKEADKYHFSISNQQEHLKISYLSSVKFDHKKNIRDNFLN
LLQKNRQGDIFKKNTSVGPHRDDLAFFINQMNASFGSQGQHRSLILSLKLAEIELIKTVTGDYPILLLDDVMSELDNYRQ
IKLLEGIKDNVQTFITTTSLEHLQQLPKKLKLFTINQGKVLSE

Nucleotide

• Length: 1092 bp

>NTDB_id=377897 HB751_RS08075 WP_002275016.1 1653039..1654130(-) (recF) [Streptococcus mutans strain P6]
ATGTGGATAGAAAAAATTAATTTAAAACATTATCGCAATTATACAGCCATTGAATCTGAATTTTCCCAAAGTCTTAATGT
TTTTGTGGGACAAAATGCTCAAGGAAAAACCAATTTCCTAGAGGCTATTTATTTTTTATCTTTAACCCGCAGTCATCGAA
CACGATCTGACAAAGAACTTATTCAATTTGGTCAAAAAGAATTAAATGTTTCTGGCCTTCTTAATCGTGTCAATGGCAAA
ATTCCTCTGGAAATCAACTTATCTAATAAAGGCCGAACAACAAAAATAAATTATCTCAAACAACCTAAACTTTCAGACTA
TATTGGAACAATGACTGTTGTTCTCTTTGCTCCAGAAGATCTTCAACTAATAAAAGGCTCCCCAAGTCTCAGAAGAAAGT
TTATTGACATTGATTTAGGACAAATCAAGCCTATTTACTTATCTGATTTATCAAATTATAATCATGTTCTTAAACAACGA
AATGCCTATTTAAAATCAGAGAAGAAGGTTGATACTGATTTTCTTTTCGTTCTAGATGAACAATTGGTAGATTATGGTAG
TAAGGTTATTGAGCATCGCCTTGATTTTATTCAAAATTTAACTAAAGAAGCTGATAAATATCATTTCTCTATTTCAAATC
AACAGGAACATTTAAAAATTTCCTACCTTTCTTCTGTTAAATTTGATCATAAAAAAAATATTCGTGATAACTTTTTAAAC
CTGCTACAAAAAAATCGGCAGGGTGATATTTTCAAAAAGAACACCAGTGTTGGTCCGCACCGAGATGATTTAGCCTTTTT
CATCAATCAAATGAACGCTAGCTTTGGTAGTCAAGGACAACATCGTAGCCTTATTTTATCTTTAAAGCTGGCTGAGATTG
AACTTATAAAAACAGTCACTGGGGATTATCCTATTCTCTTGTTAGATGATGTCATGAGTGAACTTGATAATTATAGACAA
ATCAAACTTTTAGAAGGCATCAAAGATAATGTTCAGACCTTTATAACAACAACTAGTCTTGAACATCTTCAACAACTCCC
TAAGAAACTAAAGTTATTTACTATCAACCAAGGAAAAGTGCTATCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-357)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65	99.174	0.645
recF	Bacillus subtilis subsp. subtilis str. 168	43.902	100	0.446