Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   FGL73_RS08140 Genome accession   NZ_CP042408
Coordinates   1694079..1695365 (-) Length   428 a.a.
NCBI ID   WP_021721862.1    Uniprot ID   -
Organism   Lactococcus lactis strain CBA3619     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1689079..1700365
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL73_RS08125 (FGL73_08125) - 1690270..1690806 (-) 537 WP_058205112.1 hypothetical protein -
  FGL73_RS08130 (FGL73_08130) - 1690812..1692143 (-) 1332 WP_021721864.1 FAD/NAD(P)-binding oxidoreductase -
  FGL73_RS08135 (FGL73_08135) - 1692159..1694009 (-) 1851 WP_146978281.1 proline--tRNA ligase -
  FGL73_RS08140 (FGL73_08140) eeP 1694079..1695365 (-) 1287 WP_021721862.1 RIP metalloprotease RseP Regulator
  FGL73_RS08145 (FGL73_08145) - 1695384..1696187 (-) 804 WP_038602374.1 phosphatidate cytidylyltransferase -
  FGL73_RS08150 (FGL73_08150) - 1696187..1696921 (-) 735 WP_003130589.1 isoprenyl transferase -
  FGL73_RS08155 (FGL73_08155) yajC 1697293..1697625 (-) 333 WP_021721860.1 preprotein translocase subunit YajC -
  FGL73_RS08160 (FGL73_08160) - 1697720..1698418 (-) 699 WP_146978282.1 DNA alkylation repair protein -
  FGL73_RS08165 (FGL73_08165) rlmH 1698437..1698916 (-) 480 WP_058205116.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46499.09 Da        Isoelectric Point: 6.7740

>NTDB_id=377724 FGL73_RS08140 WP_021721862.1 1694079..1695365(-) (eeP) [Lactococcus lactis strain CBA3619]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSKILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVINPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSASVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIINLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=377724 FGL73_RS08140 WP_021721862.1 1694079..1695365(-) (eeP) [Lactococcus lactis strain CBA3619]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAAAAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCGCTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAATAAATCCAGAAGCTGAAAATTCTGTTAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCAATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACGGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCAGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATCATTGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCAGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGCTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGTCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCAAGCAGGCCAATCAGCGACTGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGACAAACTTGGTGGCCCAGTTGCTATTTATCAACTCAGTGGCCAAGCCGC
GAGAGCAGGTTTGCCGACGATTATTAATCTTTTAGCTATGCTTTCAATTAATTTAGGAATTGTCAATCTTTTCCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
AAATTAA

Domains


Predicted by InterproScan.

(7-413)

(218-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.845

100

0.572

  eeP Streptococcus thermophilus LMD-9

56.613

100

0.57


Multiple sequence alignment