Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FGL76_RS08870 | Genome accession | NZ_CP042393 |
| Coordinates | 1764100..1764645 (+) | Length | 181 a.a. |
| NCBI ID | WP_004899568.1 | Uniprot ID | A0A7L8UXT3 |
| Organism | Leuconostoc citreum strain CBA3623 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1759100..1769645
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGL76_RS08845 (FGL76_08845) | - | 1759244..1760941 (+) | 1698 | WP_040176536.1 | DUF3744 domain-containing protein | - |
| FGL76_RS08850 (FGL76_08850) | - | 1760938..1761762 (+) | 825 | WP_004904505.1 | energy-coupling factor transporter transmembrane component T | - |
| FGL76_RS08855 (FGL76_08855) | pepV | 1761783..1763234 (+) | 1452 | WP_004899573.1 | dipeptidase PepV | - |
| FGL76_RS08860 (FGL76_08860) | - | 1763300..1763605 (+) | 306 | WP_004908476.1 | hypothetical protein | - |
| FGL76_RS08865 (FGL76_08865) | rpsF | 1763771..1764067 (+) | 297 | WP_004899569.1 | 30S ribosomal protein S6 | - |
| FGL76_RS08870 (FGL76_08870) | ssb | 1764100..1764645 (+) | 546 | WP_004899568.1 | single-stranded DNA-binding protein | Machinery gene |
| FGL76_RS08875 (FGL76_08875) | rpsR | 1764680..1764964 (+) | 285 | WP_004904499.1 | 30S ribosomal protein S18 | - |
| FGL76_RS08880 (FGL76_08880) | - | 1765113..1767143 (+) | 2031 | WP_004899564.1 | DHH family phosphoesterase | - |
| FGL76_RS08885 (FGL76_08885) | rplI | 1767193..1767645 (+) | 453 | WP_004899563.1 | 50S ribosomal protein L9 | - |
| FGL76_RS08890 (FGL76_08890) | dnaB | 1767647..1769113 (+) | 1467 | WP_147002459.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 181 a.a. Molecular weight: 19786.54 Da Isoelectric Point: 4.8246
>NTDB_id=377688 FGL76_RS08870 WP_004899568.1 1764100..1764645(+) (ssb) [Leuconostoc citreum strain CBA3623]
MINRVVLIGRLTRDVELRYTQSGTAVGTFSLAVNRQFTNQSGEREADFINAVIWRKAAENFANFTGKGALVAVEGRLQTR
NYENNQGQRVYVTEVVVDNFSLLESRAESDKRRAQNGTSATTPSNDNHFGGSESNNNFNAVDPFAGANQNTQKSTATSEA
PNPFAASGKTEIDISDDDLPF
MINRVVLIGRLTRDVELRYTQSGTAVGTFSLAVNRQFTNQSGEREADFINAVIWRKAAENFANFTGKGALVAVEGRLQTR
NYENNQGQRVYVTEVVVDNFSLLESRAESDKRRAQNGTSATTPSNDNHFGGSESNNNFNAVDPFAGANQNTQKSTATSEA
PNPFAASGKTEIDISDDDLPF
Nucleotide
Download Length: 546 bp
>NTDB_id=377688 FGL76_RS08870 WP_004899568.1 1764100..1764645(+) (ssb) [Leuconostoc citreum strain CBA3623]
ATGATTAATCGAGTAGTATTGATTGGGCGATTGACCCGGGATGTGGAATTACGCTATACGCAATCGGGTACAGCGGTCGG
CACGTTTAGCTTGGCGGTAAATCGCCAGTTCACTAATCAATCTGGTGAACGTGAAGCTGACTTTATTAACGCCGTTATCT
GGCGAAAAGCAGCGGAAAATTTTGCAAATTTCACTGGTAAGGGCGCTTTAGTCGCTGTCGAGGGTCGTTTGCAGACAAGA
AATTATGAAAATAATCAAGGCCAGCGTGTATACGTTACCGAGGTTGTTGTCGATAATTTCTCATTACTTGAATCACGTGC
TGAAAGCGATAAGCGTCGTGCCCAAAATGGTACGTCAGCAACAACACCTTCAAATGATAATCATTTTGGTGGTAGTGAAA
GTAATAATAACTTTAATGCTGTTGATCCTTTTGCTGGTGCAAATCAAAACACCCAAAAATCAACTGCAACAAGTGAAGCA
CCTAACCCATTTGCGGCTAGTGGCAAAACAGAAATTGATATATCAGATGATGATTTACCATTTTAA
ATGATTAATCGAGTAGTATTGATTGGGCGATTGACCCGGGATGTGGAATTACGCTATACGCAATCGGGTACAGCGGTCGG
CACGTTTAGCTTGGCGGTAAATCGCCAGTTCACTAATCAATCTGGTGAACGTGAAGCTGACTTTATTAACGCCGTTATCT
GGCGAAAAGCAGCGGAAAATTTTGCAAATTTCACTGGTAAGGGCGCTTTAGTCGCTGTCGAGGGTCGTTTGCAGACAAGA
AATTATGAAAATAATCAAGGCCAGCGTGTATACGTTACCGAGGTTGTTGTCGATAATTTCTCATTACTTGAATCACGTGC
TGAAAGCGATAAGCGTCGTGCCCAAAATGGTACGTCAGCAACAACACCTTCAAATGATAATCATTTTGGTGGTAGTGAAA
GTAATAATAACTTTAATGCTGTTGATCCTTTTGCTGGTGCAAATCAAAACACCCAAAAATCAACTGCAACAAGTGAAGCA
CCTAACCCATTTGCGGCTAGTGGCAAAACAGAAATTGATATATCAGATGATGATTTACCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
63.536 |
100 |
0.635 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
52.128 |
100 |
0.541 |