Detailed information NTG0377470

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: HA248_RS00230
• Genome accession: NZ_CP050175
• Coordinates: 39891..40784 (+)
• Length: 297 a.a.
• NCBI ID: WP_033707871.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900701590
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 34891..45784

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HA248_RS00200 (HA248_00200)	-	35204..36373 (+)	1170	WP_033707872.1	pyridoxal phosphate-dependent aminotransferase	-
HA248_RS00205 (HA248_00205)	recO	36370..37140 (+)	771	WP_000616164.1	DNA repair protein RecO	Machinery gene
HA248_RS00210 (HA248_00210)	plsX	37137..38129 (+)	993	WP_000717462.1	phosphate acyltransferase PlsX	-
HA248_RS00215 (HA248_00215)	-	38135..38368 (+)	234	WP_000136447.1	acyl carrier protein	-
HA248_RS00220 (HA248_00220)	-	38414..38704 (+)	291	Protein_35	IS5/IS1182 family transposase	-
HA248_RS00225 (HA248_00225)	blpU	38907..39137 (+)	231	WP_001093487.1	bacteriocin-like peptide BlpU	-
HA248_RS11670	-	39140..39265 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
HA248_RS11265	-	39676..39870 (+)	195	WP_000756776.1	hypothetical protein	-
HA248_RS00230 (HA248_00230)	comR	39891..40784 (+)	894	WP_033707871.1	XRE family transcriptional regulator	Regulator
HA248_RS00235 (HA248_00235)	-	41327..41623 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-
HA248_RS00240 (HA248_00240)	-	41630..42766 (+)	1137	WP_000698828.1	hypothetical protein	-
HA248_RS00245 (HA248_00245)	-	42763..43245 (+)	483	WP_001232094.1	stage II sporulation protein M	-
HA248_RS00250 (HA248_00250)	-	43242..43838 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
HA248_RS00255 (HA248_00255)	-	43819..44310 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34547.00 Da
• Isoelectric Point: 4.6099

>NTDB_id=377470 HA248_RS00230 WP_033707871.1 39891..40784(+) (comR) [Streptococcus pneumoniae strain PZ900701590]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKAIEIPKAFL
KLKDELIHSQTYADEERIKRKEAILEEIYENYYENLPEEEQLVVDVTQARFDIYGSSDVTYGLGLVEEYFQQLVKKKYFS
VNDLLILELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKASLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNILEAESFYEKAISLAELLDDQVLVQRILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=377470 HA248_RS00230 WP_033707871.1 39891..40784(+) (comR) [Streptococcus pneumoniae strain PZ900701590]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTAGATGTTAAGGCTATAGAGATTCCAAAAGCATTCCTA
AAACTTAAAGATGAGCTGATTCATTCTCAAACCTATGCTGATGAGGAAAGAATCAAACGAAAGGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTACCTGAGGAAGAACAATTAGTTGTAGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAACTAGTAAAAAAGAAATATTTTTCT
GTGAATGATTTGTTGATTCTTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGCTAGCCTAGTTCAAATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGCTAAAGGCAAAATATGCTTTATTTGTAGACAAGAATATTTTAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGACGATCAGGTATTAGTTCAGAGAATTTTAGCAGAAAAACAGATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	35.667	100	0.36