Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | FR838_RS08675 | Genome accession | NZ_CP042364 |
| Coordinates | 1808174..1808701 (-) | Length | 175 a.a. |
| NCBI ID | WP_005078479.1 | Uniprot ID | - |
| Organism | Acinetobacter pittii strain C54 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1803174..1813701
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FR838_RS08655 (FR838_08655) | - | 1803407..1804276 (-) | 870 | WP_005078473.1 | hypothetical protein | - |
| FR838_RS08660 (FR838_08660) | aroB | 1804293..1805375 (-) | 1083 | WP_005078475.1 | 3-dehydroquinate synthase | - |
| FR838_RS08665 (FR838_08665) | aroK | 1805404..1805973 (-) | 570 | WP_002116987.1 | shikimate kinase AroK | - |
| FR838_RS08670 (FR838_08670) | pilQ | 1805985..1808111 (-) | 2127 | WP_005078477.1 | type IV pilus secretin PilQ | Machinery gene |
| FR838_RS08675 (FR838_08675) | pilP | 1808174..1808701 (-) | 528 | WP_005078479.1 | pilus assembly protein PilP | Machinery gene |
| FR838_RS08680 (FR838_08680) | pilO | 1808713..1809492 (-) | 780 | WP_005067082.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FR838_RS08685 (FR838_08685) | pilN | 1809489..1810130 (-) | 642 | WP_005078482.1 | PilN domain-containing protein | Machinery gene |
| FR838_RS08690 (FR838_08690) | pilM | 1810130..1811188 (-) | 1059 | WP_005067078.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19243.39 Da Isoelectric Point: 9.7299
>NTDB_id=377438 FR838_RS08675 WP_005078479.1 1808174..1808701(-) (pilP) [Acinetobacter pittii strain C54]
MKLKKILLSLGIGLVLVGCDSRIDAVNQQMADIRNQPPQAIESAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNSRGQVMALIQTPDQQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKLKKILLSLGIGLVLVGCDSRIDAVNQQMADIRNQPPQAIESAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNSRGQVMALIQTPDQQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=377438 FR838_RS08675 WP_005078479.1 1808174..1808701(-) (pilP) [Acinetobacter pittii strain C54]
ATGAAACTAAAGAAAATTTTACTTTCTCTGGGGATAGGCTTGGTTTTGGTTGGATGCGACTCTAGAATCGACGCCGTAAA
TCAACAAATGGCCGATATACGTAATCAGCCACCACAAGCTATAGAATCGGCACCTGTTTTTACACCTGTGCCACAATTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCACTTGCTGCTGAGCTGAAAATTATGGCGGGGAAACGA
GTATATCCGAATTTCTCACGTGCACCACAGCCACTCGAAAGCTATGCATTAGAGTCCTTAAATATGAAAGGAAGTATGCG
TAATAGCCGCGGGCAAGTCATGGCTCTGATCCAAACACCTGATCAACAAATTGAGCGAGTGCAGGTAGGGAACTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCTACTCAGATTGATTTGGTGGAGATTGTCCCTGATGGGCGAGAAGGC
TATGTGGAGAGACCAAGAACCTTAGTGTTAATTGGACCCGCACCCTAA
ATGAAACTAAAGAAAATTTTACTTTCTCTGGGGATAGGCTTGGTTTTGGTTGGATGCGACTCTAGAATCGACGCCGTAAA
TCAACAAATGGCCGATATACGTAATCAGCCACCACAAGCTATAGAATCGGCACCTGTTTTTACACCTGTGCCACAATTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCACTTGCTGCTGAGCTGAAAATTATGGCGGGGAAACGA
GTATATCCGAATTTCTCACGTGCACCACAGCCACTCGAAAGCTATGCATTAGAGTCCTTAAATATGAAAGGAAGTATGCG
TAATAGCCGCGGGCAAGTCATGGCTCTGATCCAAACACCTGATCAACAAATTGAGCGAGTGCAGGTAGGGAACTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCTACTCAGATTGATTTGGTGGAGATTGTCCCTGATGGGCGAGAAGGC
TATGTGGAGAGACCAAGAACCTTAGTGTTAATTGGACCCGCACCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
87.429 |
100 |
0.874 |
| comL | Acinetobacter baylyi ADP1 |
73.373 |
96.571 |
0.709 |