Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FRG19_RS03930 | Genome accession | NZ_CP042341 |
| Coordinates | 848401..848796 (+) | Length | 131 a.a. |
| NCBI ID | WP_002435780.1 | Uniprot ID | A0A7Z7YUN8 |
| Organism | Staphylococcus capitis strain BN2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 843401..853796
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FRG19_RS03900 (FRG19_03895) | atpD | 843619..845031 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| FRG19_RS03905 (FRG19_03900) | - | 845051..845455 (+) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| FRG19_RS03910 (FRG19_03905) | - | 845596..845829 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| FRG19_RS03915 (FRG19_03910) | murA | 845939..847204 (+) | 1266 | WP_002435807.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| FRG19_RS03920 (FRG19_03915) | fabZ | 847249..847686 (+) | 438 | WP_002435844.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| FRG19_RS03925 (FRG19_03920) | - | 847767..848210 (-) | 444 | WP_049427281.1 | YwpF-like family protein | - |
| FRG19_RS03930 (FRG19_03925) | ssb | 848401..848796 (+) | 396 | WP_002435780.1 | single-stranded DNA-binding protein | Machinery gene |
| FRG19_RS03935 (FRG19_03930) | - | 849191..849916 (+) | 726 | WP_002453702.1 | transglycosylase family protein | - |
| FRG19_RS03940 (FRG19_03935) | tenA | 850211..850900 (+) | 690 | WP_002435801.1 | thiaminase II | - |
| FRG19_RS03945 (FRG19_03940) | thiD | 850893..851714 (+) | 822 | WP_049427284.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FRG19_RS03950 (FRG19_03945) | thiM | 851707..852495 (+) | 789 | WP_002435520.1 | hydroxyethylthiazole kinase | - |
| FRG19_RS03955 (FRG19_03950) | thiE | 852502..853140 (+) | 639 | WP_037551262.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15145.02 Da Isoelectric Point: 5.2691
>NTDB_id=377150 FRG19_RS03930 WP_002435780.1 848401..848796(+) (ssb) [Staphylococcus capitis strain BN2]
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=377150 FRG19_RS03930 WP_002435780.1 848401..848796(+) (ssb) [Staphylococcus capitis strain BN2]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |