Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   HBA47_RS07500 Genome accession   NZ_CP050136
Coordinates   1418085..1418789 (+) Length   234 a.a.
NCBI ID   WP_003789586.1    Uniprot ID   -
Organism   Kingella kingae strain ATCC 23332     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1413085..1423789
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBA47_RS07470 (HBA47_07505) - 1413478..1413921 (-) 444 WP_019389358.1 membrane protein -
  HBA47_RS07475 (HBA47_07510) - 1413918..1414826 (-) 909 WP_019389359.1 tyrosine-type recombinase/integrase -
  HBA47_RS07480 (HBA47_07515) - 1414908..1415159 (-) 252 WP_019389360.1 BolA/IbaG family iron-sulfur metabolism protein -
  HBA47_RS07485 (HBA47_07520) - 1415359..1416174 (-) 816 WP_026036245.1 DsbC family protein -
  HBA47_RS07490 (HBA47_07525) - 1416325..1417119 (+) 795 WP_019389363.1 3'-5' exonuclease -
  HBA47_RS11220 - 1417184..1417549 (+) 366 WP_243755347.1 hypothetical protein -
  HBA47_RS11225 - 1417590..1418045 (+) 456 WP_243755350.1 SPOR domain-containing protein -
  HBA47_RS07500 (HBA47_07535) dsbA2 1418085..1418789 (+) 705 WP_003789586.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  HBA47_RS07505 (HBA47_07540) - 1418850..1419677 (+) 828 WP_060537225.1 undecaprenyl-diphosphate phosphatase -
  HBA47_RS07510 (HBA47_07545) - 1419807..1420169 (+) 363 WP_003789582.1 hypothetical protein -
  HBA47_RS07515 (HBA47_07550) aroG 1420430..1421482 (+) 1053 WP_003785571.1 3-deoxy-7-phosphoheptulonate synthase AroG -
  HBA47_RS07520 (HBA47_07555) - 1421479..1421661 (+) 183 WP_019389366.1 hypothetical protein -
  HBA47_RS07525 (HBA47_07560) - 1421640..1422644 (-) 1005 WP_019389367.1 glucokinase -
  HBA47_RS07530 (HBA47_07565) pgl 1422625..1423323 (-) 699 WP_019389368.1 6-phosphogluconolactonase -
  HBA47_RS07535 (HBA47_07570) - 1423357..1423647 (-) 291 WP_019389369.1 hypothetical protein -

Sequence

Protein


Download         Length: 234 a.a.        Molecular weight: 25650.39 Da        Isoelectric Point: 8.4456

>NTDB_id=377062 HBA47_RS07500 WP_003789586.1 1418085..1418789(+) (dsbA2) [Kingella kingae strain ATCC 23332]
MLNKKSIAAALMALFVSVPALAATEGVDYKLAEVEVAPLQKDKIEVTEFFAYWCPHCYDLELVIARHIKTFASDTVFRAE
HVVWDKQRDFGFARLAAAVKQSGTKIQANPLIFEAVVKQKVNLGNPAVLSQWLKAQNAFDGSKVQAAFDSFSNATQATQM
ESWTDQYAISGTPTVIVGGKYQVIFNNGYEAGMTTIDELIKKVREERGMKAPAPKAATTPTHSFGASLVNSVNR

Nucleotide


Download         Length: 705 bp        

>NTDB_id=377062 HBA47_RS07500 WP_003789586.1 1418085..1418789(+) (dsbA2) [Kingella kingae strain ATCC 23332]
ATGTTGAATAAAAAAAGTATTGCCGCCGCATTGATGGCGTTGTTTGTATCTGTTCCTGCTTTGGCAGCCACCGAAGGCGT
GGACTATAAACTTGCCGAAGTGGAAGTTGCACCCCTGCAAAAAGACAAAATTGAAGTAACCGAATTTTTTGCATACTGGT
GTCCACATTGCTATGACCTAGAACTCGTTATTGCACGTCATATCAAAACCTTTGCCAGCGACACCGTATTCCGCGCGGAA
CACGTTGTGTGGGATAAACAACGCGATTTTGGTTTTGCACGTCTTGCCGCAGCGGTGAAACAATCGGGTACAAAAATACA
AGCCAACCCATTGATTTTTGAAGCCGTAGTCAAACAAAAAGTCAATTTAGGCAACCCAGCCGTTTTGTCGCAATGGCTCA
AAGCACAAAACGCATTCGATGGCAGCAAAGTGCAGGCTGCTTTTGATTCGTTCAGCAACGCCACACAAGCCACACAAATG
GAATCATGGACAGACCAATACGCCATTTCTGGCACACCAACCGTGATTGTGGGCGGCAAATACCAAGTTATTTTCAACAA
CGGCTACGAAGCAGGCATGACCACGATTGACGAACTCATCAAAAAAGTACGCGAAGAACGTGGCATGAAAGCCCCGGCAC
CCAAAGCCGCAACCACACCAACTCACAGCTTTGGCGCAAGTTTGGTTAATAGCGTAAATCGTTAA

Domains

Predicted by InterProScan.

Thioredoxin (Thioredoxin_4)

(41-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

53.005

78.205

0.415
  dsbA1 Neisseria meningitidis MC58

49.189

79.06

0.389

Multiple sequence alignment