Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   AOLE_RS18280 Genome accession   NC_014259
Coordinates   3884658..3886226 (+) Length   522 a.a.
NCBI ID   WP_013199131.1    Uniprot ID   A0AAN0PBR5
Organism   Acinetobacter oleivorans DR1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3879658..3891226
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOLE_RS18260 (AOLE_18210) - 3880150..3881451 (+) 1302 WP_005301642.1 homoserine dehydrogenase -
  AOLE_RS18265 (AOLE_18215) thrC 3881506..3882645 (+) 1140 WP_004795157.1 threonine synthase -
  AOLE_RS18270 (AOLE_18220) pbpG 3882753..3883799 (-) 1047 WP_128825344.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  AOLE_RS18275 (AOLE_18225) - 3884012..3884647 (+) 636 WP_003654436.1 response regulator -
  AOLE_RS18280 (AOLE_18230) pilS 3884658..3886226 (+) 1569 WP_013199131.1 PAS domain-containing sensor histidine kinase Regulator
  AOLE_RS18285 (AOLE_18235) pilR 3886250..3887665 (+) 1416 WP_013199132.1 sigma-54 dependent transcriptional regulator Regulator
  AOLE_RS18290 (AOLE_18240) - 3887668..3888852 (-) 1185 WP_013199133.1 S41 family peptidase -
  AOLE_RS18295 (AOLE_18245) gpmI 3888868..3890415 (-) 1548 WP_013199134.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 522 a.a.        Molecular weight: 59039.61 Da        Isoelectric Point: 6.3667

>NTDB_id=37702 AOLE_RS18280 WP_013199131.1 3884658..3886226(+) (pilS) [Acinetobacter oleivorans DR1]
MQFPLNSSLSHTIFRLGTWYGLYRLIIAVSLNIILVLTDAQIDNSLQQPALYSYTLLGYSILSLLQLLCFKFVATQATKQ
LILFFVVDVICLSLLTFSVGEPNLQLSLLYVIAIFTSAILLSARMSLLITLLAVIAVIYQRFVGSLFDYNNLNTIGNSAL
LAFLFFVVHGIGQIAVQRFKLLEALTFHQSIELYQLQNINRYILEQIEEGYLVLDENYDIALSNPAACSLLGIPPQFASE
KYPLAKWHPDLFEILKFDNLQEGDRFIFESRLSAYSINIKVQHLVVPQQALTLLILQDAQQINQQAQQLKLAALGQLSAS
IAHEIRNPLAAIVQANELLKDSDLEQQNTLRRMIGKQTKRIDSIVQDTLGLASSERTYPIQIELNNFIKTLLDEDLLDVK
HSIQLKISDSSLKLLFDEKQLRQVLINLVRNALRHNAPDSPHVLINIHSQTNKIYIDVIDYGEGVSKRDISQLFKPFFST
EINGTGLGLYLSHSFCEANHAKLTYVEQKQGACFRMECPIIY

Nucleotide


Download         Length: 1569 bp        

>NTDB_id=37702 AOLE_RS18280 WP_013199131.1 3884658..3886226(+) (pilS) [Acinetobacter oleivorans DR1]
ATGCAATTTCCCTTAAACTCATCGTTGTCCCATACGATTTTTCGTTTGGGCACGTGGTATGGTTTATATCGTCTTATTAT
TGCGGTTAGCCTCAATATTATTTTGGTTTTAACCGATGCTCAAATCGACAATAGTCTACAACAACCCGCTTTATATTCTT
ATACCCTGCTCGGCTATTCCATATTAAGCCTTCTTCAGCTTTTGTGTTTTAAGTTTGTTGCAACTCAGGCAACCAAGCAG
CTTATTTTATTTTTTGTAGTTGATGTTATCTGCCTGAGTTTACTTACATTTTCTGTAGGCGAACCAAATCTACAACTCAG
CTTGCTGTATGTTATTGCTATATTTACCTCGGCAATTTTACTCAGCGCAAGAATGTCTTTACTCATTACATTACTTGCTG
TCATTGCCGTGATTTACCAACGTTTTGTTGGTAGTTTATTTGACTACAATAATCTAAATACGATTGGTAATAGTGCTTTA
TTAGCCTTCTTATTTTTTGTGGTGCATGGCATCGGGCAAATTGCAGTACAGCGCTTTAAACTACTTGAAGCACTGACTTT
CCACCAATCCATAGAACTCTATCAACTACAAAATATTAACCGCTATATTTTGGAACAAATTGAAGAAGGCTATTTGGTTC
TAGATGAAAACTACGACATTGCTTTAAGCAATCCAGCTGCCTGCTCTCTGTTAGGGATTCCCCCTCAATTTGCCAGTGAA
AAATACCCTTTAGCGAAATGGCACCCCGATTTATTTGAAATTCTTAAGTTTGATAACCTGCAAGAAGGCGATCGATTTAT
TTTTGAATCTCGACTATCGGCATATTCTATTAATATTAAAGTGCAACATCTTGTGGTGCCGCAACAAGCATTGACGCTAC
TCATCTTACAAGATGCACAGCAGATTAATCAGCAAGCTCAACAACTCAAACTTGCTGCCTTAGGGCAACTTTCAGCCAGC
ATTGCACATGAAATCCGTAATCCCCTAGCAGCCATTGTTCAGGCAAATGAATTACTTAAAGATAGTGATTTAGAACAGCA
AAATACTTTACGTCGTATGATTGGTAAGCAAACAAAGCGCATCGATAGTATTGTTCAAGACACATTAGGACTGGCCAGCA
GCGAAAGAACTTACCCAATCCAAATTGAATTAAACAATTTCATAAAGACGTTATTAGACGAAGATCTTTTAGATGTTAAA
CATTCTATACAGCTTAAAATTTCCGATTCATCCTTAAAATTATTATTTGATGAGAAACAACTTAGGCAGGTGCTCATTAA
CCTTGTCAGAAATGCTTTACGACATAATGCACCCGATTCACCCCATGTTCTGATCAACATTCATTCACAAACAAATAAAA
TTTATATTGATGTGATCGATTACGGCGAAGGGGTTTCAAAACGTGATATATCTCAATTATTTAAACCATTTTTTAGTACC
GAAATTAATGGAACTGGTTTAGGATTATATTTGTCTCATAGTTTTTGTGAGGCAAACCATGCAAAGCTCACTTATGTAGA
GCAAAAACAAGGGGCATGCTTCCGAATGGAATGCCCAATAATATATTGA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(417-518)

His Kinase A (phospho-acceptor) domain (HisKA)

(313-375)

PAS fold (PAS)

(203-255)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

93.487

100

0.935

Multiple sequence alignment