Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   HBA48_RS07670 Genome accession   NZ_CP050135
Coordinates   1473253..1473957 (+) Length   234 a.a.
NCBI ID   WP_166503276.1    Uniprot ID   -
Organism   Kingella kingae strain ATCC 23331     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1468253..1478957
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBA48_RS07640 (HBA48_07675) - 1468645..1469088 (-) 444 WP_003789597.1 membrane protein -
  HBA48_RS07645 (HBA48_07680) - 1469085..1469993 (-) 909 WP_038306872.1 tyrosine-type recombinase/integrase -
  HBA48_RS07650 (HBA48_07685) - 1470075..1470326 (-) 252 WP_003785591.1 BolA/IbaG family iron-sulfur metabolism protein -
  HBA48_RS07655 (HBA48_07690) - 1470526..1471341 (-) 816 WP_003789592.1 DsbC family protein -
  HBA48_RS07660 (HBA48_07695) - 1471495..1472289 (+) 795 WP_038306876.1 3'-5' exonuclease -
  HBA48_RS07665 (HBA48_07700) - 1472354..1473214 (+) 861 WP_038311109.1 SPOR domain-containing protein -
  HBA48_RS07670 (HBA48_07705) dsbA2 1473253..1473957 (+) 705 WP_166503276.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  HBA48_RS07675 (HBA48_07710) - 1474018..1474845 (+) 828 WP_038311505.1 undecaprenyl-diphosphate phosphatase -
  HBA48_RS07680 (HBA48_07715) - 1474975..1475337 (+) 363 WP_003789582.1 hypothetical protein -
  HBA48_RS07685 (HBA48_07720) aroG 1475598..1476650 (+) 1053 WP_038311114.1 3-deoxy-7-phosphoheptulonate synthase AroG -
  HBA48_RS07690 (HBA48_07725) - 1476647..1477189 (+) 543 WP_164538065.1 type IV secretion protein Rhs -
  HBA48_RS07695 (HBA48_07730) - 1477253..1478257 (-) 1005 WP_003789579.1 glucokinase -
  HBA48_RS07700 (HBA48_07735) pgl 1478238..1478936 (-) 699 WP_003789578.1 6-phosphogluconolactonase -

Sequence

Protein


Download         Length: 234 a.a.        Molecular weight: 25727.52 Da        Isoelectric Point: 8.4456

>NTDB_id=377000 HBA48_RS07670 WP_166503276.1 1473253..1473957(+) (dsbA2) [Kingella kingae strain ATCC 23331]
MLNKKSIAAALMALFVSVPALAATEGVDYKLAEVEVAPLQKDKIEVTEFFAYWCPHCYDLEPVIARHIKTFASDTVFRAE
HIVWDKQRDFGFARLAAAVKQSGTKIQANPFIFEAVIKQKVNLGNPAVLSQWLKAQTAFDGSKVQAAFDSFSNATQATQM
ESWTDQYAISGTPTVIVGGKYQVIFNNGYEAGMTTIDELIKKVREERGMKVLAPKAATTPTHSFGASLVNSVNR

Nucleotide


Download         Length: 705 bp        

>NTDB_id=377000 HBA48_RS07670 WP_166503276.1 1473253..1473957(+) (dsbA2) [Kingella kingae strain ATCC 23331]
ATGTTGAATAAAAAAAGTATTGCCGCCGCATTGATGGCGTTGTTTGTATCTGTTCCTGCGTTGGCAGCCACCGAAGGCGT
GGACTATAAACTTGCCGAAGTGGAAGTTGCACCCTTGCAAAAAGACAAAATTGAAGTAACCGAATTTTTTGCATACTGGT
GTCCACATTGCTATGACCTAGAACCCGTTATTGCACGTCATATCAAAACCTTTGCCAGCGACACCGTATTCCGCGCGGAA
CACATTGTGTGGGATAAACAACGCGATTTTGGTTTTGCACGTCTTGCCGCAGCGGTGAAACAATCGGGTACAAAAATACA
AGCCAACCCATTTATTTTTGAAGCTGTAATTAAACAAAAAGTCAATTTAGGCAACCCAGCCGTTTTGTCGCAATGGCTCA
AAGCACAAACCGCATTCGATGGCAGCAAAGTGCAGGCTGCTTTTGATTCGTTCAGCAACGCCACACAAGCCACACAAATG
GAATCATGGACAGACCAATACGCCATTTCTGGCACACCAACCGTGATTGTGGGCGGCAAATACCAAGTTATTTTCAACAA
CGGCTACGAAGCAGGCATGACCACGATTGACGAACTCATCAAAAAAGTACGCGAAGAACGTGGCATGAAAGTCCTGGCAC
CCAAAGCCGCAACCACACCAACTCACAGCTTTGGCGCAAGTTTGGTTAATAGCGTAAATCGTTAA

Domains

Predicted by InterProScan.

Thioredoxin (Thioredoxin_4)

(41-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

53.005

78.205

0.415
  dsbA1 Neisseria meningitidis MC58

49.189

79.06

0.389