Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   AOLE_RS02380 Genome accession   NC_014259
Coordinates   492613..493497 (+) Length   294 a.a.
NCBI ID   WP_013196795.1    Uniprot ID   A0AAN0UBX0
Organism   Acinetobacter oleivorans DR1     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 487613..498497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOLE_RS02355 (AOLE_02310) - 487925..489172 (-) 1248 WP_013196792.1 YihY family inner membrane protein -
  AOLE_RS02360 (AOLE_02315) wrbA 489533..490141 (+) 609 WP_023274375.1 NAD(P)H:quinone oxidoreductase -
  AOLE_RS02365 (AOLE_02320) - 490190..490765 (-) 576 WP_004789579.1 xanthine phosphoribosyltransferase -
  AOLE_RS02370 (AOLE_02325) - 490837..491550 (-) 714 WP_004789577.1 DUF3108 domain-containing protein -
  AOLE_RS02375 (AOLE_02330) - 491709..492380 (-) 672 WP_013196794.1 hypothetical protein -
  AOLE_RS02380 (AOLE_02335) tonB2 492613..493497 (+) 885 WP_013196795.1 energy transducer TonB Machinery gene
  AOLE_RS02385 (AOLE_02340) ybeY 493598..494080 (-) 483 WP_004789571.1 rRNA maturation RNase YbeY -
  AOLE_RS02390 (AOLE_02345) - 494090..495178 (-) 1089 WP_004789570.1 PhoH family protein -
  AOLE_RS02395 (AOLE_02350) miaB 495216..496667 (-) 1452 WP_005301343.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33634.10 Da        Isoelectric Point: 9.1724

>NTDB_id=37678 AOLE_RS02380 WP_013196795.1 492613..493497(+) (tonB2) [Acinetobacter oleivorans DR1]
MLNRRSLSIEPFYHWWQDRVFIAATILAILLHVFVLLIHFAMPSPSEQSTKEIAISIRSSNEPVQQADFLAQADQQGSGT
FREAHRTSSDTPNPMPNDASTGNAELESLQKVQQQRELKFEEKVLMTVLSWQKQADASQRKKELEQLQSQFQAKAAMVAS
LEAQYLQRRQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLRGEVRLMVILNAQGGIRAIRL
LESSGHSILDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAQAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=37678 AOLE_RS02380 WP_013196795.1 492613..493497(+) (tonB2) [Acinetobacter oleivorans DR1]
ATGTTGAACAGAAGAAGTCTATCCATAGAGCCTTTTTACCATTGGTGGCAAGACCGAGTCTTTATTGCTGCAACCATATT
GGCAATCTTACTGCATGTTTTTGTGTTGCTCATCCACTTTGCCATGCCTAGCCCGTCAGAGCAATCTACTAAAGAAATTG
CAATTTCAATTCGATCAAGCAATGAGCCAGTTCAGCAGGCAGACTTTTTGGCACAAGCGGACCAGCAGGGTTCGGGCACA
TTTCGTGAAGCCCATCGTACCTCTAGTGATACTCCAAATCCGATGCCTAATGATGCTTCAACAGGAAATGCAGAGTTAGA
AAGTTTGCAAAAGGTTCAGCAACAAAGAGAGCTTAAATTTGAAGAAAAAGTCTTAATGACTGTTTTGAGTTGGCAAAAAC
AAGCTGATGCGAGTCAAAGGAAAAAAGAACTAGAACAATTACAAAGTCAATTTCAGGCAAAAGCTGCGATGGTTGCGAGT
CTTGAAGCACAATATTTACAACGTAGACAAGATTTCAGTCGGCAACAAAAAATCAAAACAGTAGATGGAATTCAAGCGAA
GAAAGATGCTTCGGCTGCTTATTTAGATAAGTTCCGTGAAAAAGTAGAGTTGTATGGTAATCGCTATTATCCAGAAGAAG
CCAAACAACAACAGCTAAGAGGCGAAGTCCGTTTAATGGTGATTTTGAATGCCCAAGGCGGAATTCGTGCAATTCGATTA
CTTGAAAGCTCAGGACACTCAATATTAGATGAAGCAGCTAAGTCTTCAGTACGTCGCGGTGCACCATTTGGTCATTTCGA
TGCCAATATGAAAGATATTTCTGAATTACGTATTGTACGTACGTGGCGTTTCGATCCGGCTCAAGCAGAATTTGAAGTAC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

88.095

100

0.881

Multiple sequence alignment