Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   FQ488_RS08425 Genome accession   NZ_CP042289
Coordinates   1801240..1802508 (-) Length   422 a.a.
NCBI ID   WP_010737779.1    Uniprot ID   -
Organism   Enterococcus hirae strain HDC14-2     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1796240..1807508
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQ488_RS08405 (FQ488_08450) - 1797119..1797484 (-) 366 WP_010737776.1 helix-turn-helix domain-containing protein -
  FQ488_RS08410 (FQ488_08455) - 1797616..1798458 (+) 843 WP_185184692.1 aldo/keto reductase -
  FQ488_RS08415 (FQ488_08460) - 1798475..1799269 (+) 795 WP_010737778.1 SDR family NAD(P)-dependent oxidoreductase -
  FQ488_RS08420 (FQ488_08465) - 1799467..1801170 (-) 1704 WP_010718877.1 proline--tRNA ligase -
  FQ488_RS08425 (FQ488_08470) eeP 1801240..1802508 (-) 1269 WP_010737779.1 RIP metalloprotease RseP Regulator
  FQ488_RS08430 (FQ488_08475) - 1802892..1803692 (-) 801 WP_034866992.1 phosphatidate cytidylyltransferase -
  FQ488_RS08435 (FQ488_08480) - 1803689..1804498 (-) 810 WP_010718874.1 isoprenyl transferase -
  FQ488_RS08440 (FQ488_08485) frr 1804728..1805285 (-) 558 WP_010737781.1 ribosome recycling factor -
  FQ488_RS08445 (FQ488_08490) pyrH 1805289..1806011 (-) 723 WP_010718872.1 UMP kinase -
  FQ488_RS08450 (FQ488_08495) tsf 1806233..1807114 (-) 882 WP_010718871.1 translation elongation factor Ts -

Sequence


Protein


Download         Length: 422 a.a.        Molecular weight: 46003.56 Da        Isoelectric Point: 5.4616

>NTDB_id=376660 FQ488_RS08425 WP_010737779.1 1801240..1802508(-) (eeP) [Enterococcus hirae strain HDC14-2]
MKTIITFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINLSKKVQLTNSIPMELIRYDLEEELTITGYVNGEEEQEVTYSVAHDASIIEADGTELRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFLLAILLFILLAFMHGGVQVTNTNQIGEVLPNGAAQTAGLKENDKILEINGNAIHSWG
DLTATITENPGKKLSVEVERNGQKQTLSVTPGVVESNGKKYGQLGIKAPMKTGFFDKIIGGTQQAFSSSLEIFKALGSLF
TNFSLNKLGGPVMMFQLSSEAADQGILTVISLMAILSMNLGIVNLLPIPALDGGKLVLNVVEGIRGKPISQEKEGFITLA
GFGLLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=376660 FQ488_RS08425 WP_010737779.1 1801240..1802508(-) (eeP) [Enterococcus hirae strain HDC14-2]
ATGAAAACAATTATTACATTTATTATTGTTTTTGGCATTTTGGTCATTGTTCATGAATTTGGACACTTCTTCTTTGCGAA
ACGATCAGGAATTCTCGTTCGAGAGTTTGCAATTGGTATGGGACCCAAAATCTATGGGCATCAAGCTAAGGACGGAACTA
CCTATACACTACGTTTATTGCCAATCGGAGGTTATGTGAGGATGGCAGGAAACGGGGACGATGAAACAGAGATGGCTCCG
GGAATGCCGTTATCTCTTTTATTAAATTCTGATGGTATCGTAGAGAAAATCAATTTAAGTAAAAAAGTACAGCTTACAAA
TAGTATCCCGATGGAATTGATTCGTTATGATCTTGAAGAAGAATTAACGATTACTGGCTATGTCAATGGCGAGGAAGAAC
AAGAAGTGACTTATTCTGTCGCGCATGATGCTTCGATCATTGAAGCCGATGGCACAGAACTTCGAATCGCTCCAAAAGAC
GTGCAGTTCCAATCAGCCAAATTATGGCAACGGATGTTGACGAATTTCGCAGGACCAATGAATAATTTCTTGTTAGCTAT
TTTGTTATTTATTCTGCTTGCTTTTATGCATGGCGGAGTTCAAGTCACTAACACGAACCAAATTGGCGAAGTCTTACCTA
ATGGTGCAGCACAAACTGCTGGTTTAAAAGAAAATGATAAAATCTTGGAGATCAATGGTAATGCCATTCATTCTTGGGGA
GATCTAACGGCTACGATCACCGAGAATCCTGGGAAAAAACTCAGTGTTGAAGTCGAGCGCAATGGACAGAAACAAACCCT
TTCAGTAACACCAGGCGTGGTAGAATCGAATGGAAAAAAATATGGGCAATTAGGAATCAAAGCACCAATGAAAACGGGAT
TTTTTGACAAAATCATTGGAGGAACACAACAAGCTTTCAGTAGTTCATTAGAAATTTTTAAAGCACTAGGCTCATTATTT
ACAAACTTTAGTTTAAATAAATTGGGCGGTCCTGTAATGATGTTCCAATTATCTTCAGAAGCTGCAGATCAAGGAATATT
AACGGTCATTAGCTTGATGGCCATTCTTTCGATGAATTTGGGAATCGTTAACTTATTACCAATTCCAGCGCTTGACGGAG
GAAAGCTTGTCTTGAACGTCGTGGAAGGGATTCGTGGAAAACCAATCAGCCAAGAAAAAGAAGGCTTTATCACATTAGCA
GGCTTCGGTTTATTGATGCTTTTAATGGTATTAGTCACATGGAATGATATCCAACGATTCTTTTTCTAG

Domains


Predicted by InterproScan.

(199-270)

(6-408)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

56.776

100

0.576

  eeP Streptococcus thermophilus LMG 18311

56.542

100

0.573


Multiple sequence alignment