Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   FPV14_RS05655 Genome accession   NZ_CP042286
Coordinates   1178964..1179950 (+) Length   328 a.a.
NCBI ID   WP_146501747.1    Uniprot ID   -
Organism   Staphylococcus argenteus strain B3-25B     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1173964..1184950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPV14_RS05630 (FPV14_05630) opp4B 1174146..1175108 (+) 963 WP_000239821.1 oligopeptide ABC transporter permease -
  FPV14_RS05635 (FPV14_05635) opp4C 1175119..1176000 (+) 882 WP_001180303.1 oligopeptide ABC transporter permease -
  FPV14_RS05640 (FPV14_05640) trpS 1176060..1177049 (-) 990 WP_047556870.1 tryptophan--tRNA ligase -
  FPV14_RS05645 (FPV14_05645) spxA 1177343..1177738 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  FPV14_RS05650 (FPV14_05650) mecA 1178109..1178828 (+) 720 WP_001217738.1 adaptor protein MecA -
  FPV14_RS05655 (FPV14_05655) coiA 1178964..1179950 (+) 987 WP_146501747.1 competence protein CoiA Machinery gene
  FPV14_RS05660 (FPV14_05660) pepF 1179998..1181806 (+) 1809 WP_047429890.1 oligoendopeptidase F -
  FPV14_RS05665 (FPV14_05665) yjbH 1182377..1183183 (-) 807 WP_031787339.1 protease adaptor protein YjbH -
  FPV14_RS05670 (FPV14_05670) - 1183206..1183571 (-) 366 WP_031787340.1 truncated hemoglobin YjbI -
  FPV14_RS05675 (FPV14_05675) - 1183693..1184286 (-) 594 WP_047556868.1 CYTH domain-containing protein -
  FPV14_RS05680 (FPV14_05680) - 1184470..1184817 (+) 348 WP_001242105.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38714.23 Da        Isoelectric Point: 9.8203

>NTDB_id=376616 FPV14_RS05655 WP_146501747.1 1178964..1179950(+) (coiA) [Staphylococcus argenteus strain B3-25B]
MLIALNKERQRVSATSAERALQYFCPACGNPVILKRGHKVVSHFAHKHLTEQKCFNNETIKHYKSKLTLAQMLMQQGYQV
EIEPFLKEIRQIPDLIINNKYAFELQLSPIPYRQVLQRTEGLNKLGYKVVWLLDDIQIFQSKVKLSHFQSVFINPITRRF
YTFNLEKQQIFEFKQLQSLGGNNFLATKMEAHIKELFIEIPHNVKSIIKLSKSSINQYIKYCRWQNSVLQPTLSAMYQLR
LTDEAVVINYGYIFPEQIYIENHPIEWQLHVDLMLNSKDNLTIYDFLDYFKIRNFLIPLESKLVIVKKLINNYLNLNSKR
GNDVQILL

Nucleotide


Download         Length: 987 bp        

>NTDB_id=376616 FPV14_RS05655 WP_146501747.1 1178964..1179950(+) (coiA) [Staphylococcus argenteus strain B3-25B]
ATGTTAATAGCTTTAAATAAAGAAAGACAACGAGTGTCAGCAACATCTGCTGAAAGAGCGTTGCAATATTTTTGTCCAGC
ATGTGGAAATCCGGTTATTTTAAAAAGGGGACATAAAGTAGTAAGTCATTTTGCACATAAGCATTTAACAGAACAAAAAT
GTTTTAATAATGAGACGATTAAACATTACAAAAGCAAATTAACATTAGCACAAATGTTAATGCAGCAAGGATATCAAGTT
GAAATAGAGCCATTTTTAAAAGAAATTAGACAGATTCCTGATTTAATAATTAACAATAAATATGCATTTGAACTACAATT
ATCACCTATACCCTATAGACAAGTTTTACAACGTACAGAAGGTTTGAATAAATTAGGCTATAAAGTTGTTTGGTTGCTTG
ATGATATACAAATATTTCAAAGTAAGGTGAAATTAAGTCATTTTCAAAGTGTTTTTATCAATCCAATTACACGAAGATTC
TATACATTTAATTTAGAGAAACAACAGATTTTTGAATTTAAACAATTACAAAGTTTAGGTGGCAACAATTTTTTGGCAAC
TAAAATGGAAGCACATATTAAAGAATTATTTATTGAGATACCACACAATGTTAAATCAATTATTAAATTATCTAAATCCT
CTATTAATCAATATATCAAATATTGTCGCTGGCAAAACTCGGTATTACAACCAACATTAAGTGCTATGTATCAATTACGG
TTAACAGATGAAGCTGTAGTGATTAATTATGGCTATATTTTCCCAGAACAAATATATATCGAAAATCATCCGATAGAATG
GCAATTACACGTTGATTTAATGTTAAATAGTAAGGATAATCTCACTATTTATGATTTTTTAGATTACTTCAAAATAAGGA
ATTTTTTAATACCTTTAGAATCAAAGTTAGTAATTGTGAAAAAACTTATTAACAATTATTTAAATCTTAATTCAAAAAGA
GGTAATGACGTGCAAATTTTGTTGTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(5-191)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

68.598

100

0.686
  coiA Staphylococcus aureus MW2

68.293

100

0.683

Multiple sequence alignment