Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   FQU71_RS15305 Genome accession   NZ_CP042254
Coordinates   3313909..3314568 (-) Length   219 a.a.
NCBI ID   WP_003635449.1    Uniprot ID   D3HKW5
Organism   Legionella longbeachae strain B3526CHC     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3308909..3319568
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQU71_RS15290 (FQU71_15290) - 3310406..3310972 (-) 567 WP_172622928.1 endopeptidase IV -
  FQU71_RS15295 (FQU71_15295) - 3310981..3311694 (-) 714 WP_150866978.1 L,D-transpeptidase -
  FQU71_RS15300 (FQU71_15300) uvrC 3311921..3313783 (-) 1863 WP_404809686.1 excinuclease ABC subunit UvrC -
  FQU71_RS15305 (FQU71_15305) letA 3313909..3314568 (-) 660 WP_003635449.1 two-component system response regulator LetA Regulator
  FQU71_RS15310 (FQU71_15310) phhA 3314677..3315495 (-) 819 WP_003635447.1 phenylalanine 4-monooxygenase -
  FQU71_RS15315 (FQU71_15315) - 3315777..3316631 (-) 855 WP_150866980.1 hypothetical protein -
  FQU71_RS15320 (FQU71_15320) dinB 3316818..3317885 (-) 1068 WP_150867609.1 DNA polymerase IV -
  FQU71_RS15325 (FQU71_15325) - 3318088..3318594 (-) 507 WP_150866981.1 LexA family transcriptional regulator -

Sequence


Protein


Download         Length: 219 a.a.        Molecular weight: 24346.37 Da        Isoelectric Point: 5.1733

>NTDB_id=376350 FQU71_RS15305 WP_003635449.1 3313909..3314568(-) (letA) [Legionella longbeachae strain B3526CHC]
MIKVLIVDDHALVRMGIRRLLEDMSDVEVVADAESGEQALVLVKQYSPDVVLLDMKMPGIDGWEVTRRLKKSNPHVKVIA
VTAMCSDVLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAKGEKYLSAEIAQKMAINSLEEAQGSPFNILSEREMQVMLMI
TSGMNVQEISDRLFLSTKTINGYRYRTFEKLGIKNDVELTYLALKHGIIENPTGLTSEE

Nucleotide


Download         Length: 660 bp        

>NTDB_id=376350 FQU71_RS15305 WP_003635449.1 3313909..3314568(-) (letA) [Legionella longbeachae strain B3526CHC]
TTGATTAAAGTATTAATTGTTGATGACCATGCATTGGTTCGAATGGGTATTCGACGATTACTCGAAGATATGTCAGATGT
TGAAGTTGTTGCTGATGCAGAAAGTGGTGAACAAGCTTTAGTATTAGTAAAGCAATATTCCCCTGACGTAGTTCTTTTAG
ATATGAAAATGCCTGGGATAGATGGCTGGGAAGTAACCCGTCGTCTAAAAAAATCAAATCCACATGTTAAAGTCATAGCG
GTAACTGCAATGTGTTCTGATGTATTGCCCACCCGTGTTTTGCAATTAGGGGCTATGGGATATCTCACTAAAGAATCGGG
TGCTGAAGAAATGGCCGCTGCGATACGTAAGGTAGCTAAAGGGGAAAAATACCTTAGTGCTGAAATTGCTCAAAAAATGG
CAATCAACAGTTTGGAAGAAGCTCAAGGCTCACCTTTTAATATATTATCTGAACGAGAAATGCAGGTAATGTTGATGATT
ACCAGTGGCATGAATGTTCAGGAAATCAGCGATAGGCTTTTCTTGAGTACTAAAACAATCAATGGATATCGTTATCGTAC
GTTTGAGAAATTAGGTATAAAAAATGATGTTGAGCTGACCTACTTAGCTTTGAAACATGGAATCATAGAAAATCCTACTG
GTTTGACGTCAGAAGAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB D3HKW5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

87.215

100

0.872

  letA Legionella pneumophila strain ERS1305867

87.215

100

0.872


Multiple sequence alignment