Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | FP515_RS13145 | Genome accession | NZ_CP042251 |
| Coordinates | 2519241..2519537 (-) | Length | 98 a.a. |
| NCBI ID | WP_011231915.1 | Uniprot ID | U2X350 |
| Organism | Geobacillus thermoleovorans strain ARTRW1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2514241..2524537
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FP515_RS13110 (FP515_13110) | - | 2514841..2516505 (+) | 1665 | WP_014196337.1 | DEAD/DEAH box helicase | - |
| FP515_RS13115 (FP515_13115) | - | 2516492..2517286 (+) | 795 | WP_011231909.1 | YqhG family protein | - |
| FP515_RS13120 (FP515_13120) | - | 2517389..2517568 (-) | 180 | WP_011231910.1 | YqzE family protein | - |
| FP515_RS13125 (FP515_13125) | comGG | 2517615..2518004 (-) | 390 | WP_014196338.1 | competence type IV pilus minor pilin ComGG | - |
| FP515_RS13130 (FP515_13130) | comGF | 2518079..2518525 (-) | 447 | WP_014196339.1 | competence type IV pilus minor pilin ComGF | - |
| FP515_RS13135 (FP515_13135) | - | 2518504..2518830 (-) | 327 | WP_011231913.1 | type II secretion system protein | - |
| FP515_RS13140 (FP515_13140) | comGD | 2518814..2519251 (-) | 438 | WP_011231914.1 | competence type IV pilus minor pilin ComGD | - |
| FP515_RS13145 (FP515_13145) | comGC | 2519241..2519537 (-) | 297 | WP_011231915.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FP515_RS13150 (FP515_13150) | comGB | 2519740..2520768 (-) | 1029 | WP_014196341.1 | competence type IV pilus assembly protein ComGB | - |
| FP515_RS13155 (FP515_13155) | comGA | 2520765..2521838 (-) | 1074 | WP_011231917.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FP515_RS13160 (FP515_13160) | - | 2522031..2522729 (+) | 699 | WP_011231918.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| FP515_RS13165 (FP515_13165) | - | 2522888..2523130 (+) | 243 | WP_008879854.1 | DUF2626 family protein | - |
| FP515_RS13170 (FP515_13170) | - | 2523214..2524347 (-) | 1134 | WP_020278526.1 | class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 10749.59 Da Isoelectric Point: 7.2422
>NTDB_id=376224 FP515_RS13145 WP_011231915.1 2519241..2519537(-) (comGC) [Geobacillus thermoleovorans strain ARTRW1]
MNQKGFTLIEMLIVMMVISVLLLIAIPNMTKHNSMINSKGCEAFLNTVQAQVKAYEMEHNKIPTVQELLAGRYIKSDKCP
NGHAIQISANGDVSESGS
MNQKGFTLIEMLIVMMVISVLLLIAIPNMTKHNSMINSKGCEAFLNTVQAQVKAYEMEHNKIPTVQELLAGRYIKSDKCP
NGHAIQISANGDVSESGS
Nucleotide
Download Length: 297 bp
>NTDB_id=376224 FP515_RS13145 WP_011231915.1 2519241..2519537(-) (comGC) [Geobacillus thermoleovorans strain ARTRW1]
ATGAATCAAAAAGGATTCACATTGATCGAAATGTTGATCGTTATGATGGTGATTTCTGTCCTGCTGCTGATTGCCATTCC
GAATATGACAAAGCACAACAGCATGATCAATTCGAAAGGATGCGAGGCGTTTTTGAACACCGTGCAAGCGCAGGTGAAAG
CGTATGAGATGGAGCATAACAAAATTCCGACGGTGCAGGAATTGCTCGCTGGCCGCTATATCAAGTCGGACAAATGTCCG
AACGGTCATGCGATCCAAATCAGCGCGAACGGCGATGTGAGTGAAAGTGGCTCGTAA
ATGAATCAAAAAGGATTCACATTGATCGAAATGTTGATCGTTATGATGGTGATTTCTGTCCTGCTGCTGATTGCCATTCC
GAATATGACAAAGCACAACAGCATGATCAATTCGAAAGGATGCGAGGCGTTTTTGAACACCGTGCAAGCGCAGGTGAAAG
CGTATGAGATGGAGCATAACAAAATTCCGACGGTGCAGGAATTGCTCGCTGGCCGCTATATCAAGTCGGACAAATGTCCG
AACGGTCATGCGATCCAAATCAGCGCGAACGGCGATGTGAGTGAAAGTGGCTCGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
52.747 |
92.857 |
0.49 |
| comGC | Staphylococcus aureus MW2 |
41.935 |
94.898 |
0.398 |
| comGC | Staphylococcus aureus N315 |
41.935 |
94.898 |
0.398 |