Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   FPS98_RS25865 Genome accession   NZ_CP042161
Coordinates   5368453..5369406 (+) Length   317 a.a.
NCBI ID   WP_144618559.1    Uniprot ID   -
Organism   Brevibacillus brevis strain HK544     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5363453..5374406
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPS98_RS25850 (FPS98_25850) - 5366066..5366422 (-) 357 WP_144618557.1 response regulator -
  FPS98_RS25855 (FPS98_25855) - 5366763..5367281 (-) 519 WP_261375987.1 Crp/Fnr family transcriptional regulator -
  FPS98_RS25860 (FPS98_25860) - 5367440..5368204 (+) 765 WP_144618558.1 DUF4097 family beta strand repeat-containing protein -
  FPS98_RS25865 (FPS98_25865) ceuB 5368453..5369406 (+) 954 WP_144618559.1 ABC transporter permease Machinery gene
  FPS98_RS25870 (FPS98_25870) - 5369403..5370341 (+) 939 WP_144618560.1 iron chelate uptake ABC transporter family permease subunit -
  FPS98_RS25875 (FPS98_25875) - 5370338..5371096 (+) 759 WP_144618561.1 ABC transporter ATP-binding protein -
  FPS98_RS25880 (FPS98_25880) - 5371208..5372185 (+) 978 WP_144618562.1 siderophore ABC transporter substrate-binding protein -
  FPS98_RS25885 (FPS98_25885) - 5372271..5372927 (-) 657 WP_144618563.1 DJ-1/PfpI family protein -
  FPS98_RS25890 (FPS98_25890) - 5373097..5373960 (-) 864 WP_144618564.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35146.40 Da        Isoelectric Point: 9.5465

>NTDB_id=375841 FPS98_RS25865 WP_144618559.1 5368453..5369406(+) (ceuB) [Brevibacillus brevis strain HK544]
MKKRYLVVALILLSFVSLFIGVKDISPWDLFNLTDDKVQVLWISRIPRLISIIIAGISMSIVGLIMQQLTRNKFVSPTTA
GTEDSVRFGILISLLVFVDASPWVKLFVAFACSLLGTFIFMKILDRIKFKDSIFIPLVGLMFGNIVGSITTFFAYKHDLM
QNMSAWLHGDFSTIMKGSYELLYISIPLVIIAYMYANKFTIAGMGEEFAINLGLNYKQVVNIGLIIVACVTSVVILTVGA
IPFLGLIIPNLVTLYLGDNLKKSLSHTALLGAVFVLACDILGRLIIFPYEISIGLMVGVIGSGVFVYLLMRRKAYEQ

Nucleotide


Download         Length: 954 bp        

>NTDB_id=375841 FPS98_RS25865 WP_144618559.1 5368453..5369406(+) (ceuB) [Brevibacillus brevis strain HK544]
ATGAAAAAGAGATATTTGGTTGTAGCACTTATTTTGCTCTCGTTCGTTTCACTTTTTATTGGTGTGAAAGATATATCTCC
GTGGGATCTGTTCAATCTCACAGATGACAAAGTGCAAGTACTGTGGATCAGCCGGATTCCGCGATTAATCAGTATCATTA
TCGCAGGGATAAGCATGAGTATCGTCGGCTTGATCATGCAGCAGTTGACCCGAAACAAGTTTGTTTCGCCCACGACAGCG
GGGACAGAGGATTCCGTTCGCTTCGGAATATTGATCTCTCTTTTGGTTTTCGTCGATGCCAGTCCATGGGTAAAGCTGTT
CGTTGCTTTTGCTTGCTCTCTCTTGGGAACGTTTATCTTTATGAAGATCCTTGATCGAATCAAATTCAAGGACTCCATTT
TCATCCCGTTGGTGGGATTGATGTTTGGGAATATCGTCGGTTCCATTACGACGTTTTTTGCTTATAAACACGACTTGATG
CAAAACATGTCTGCTTGGTTGCATGGAGATTTCTCCACCATTATGAAAGGCAGCTATGAGCTTTTGTACATAAGCATTCC
ACTGGTGATTATCGCCTACATGTATGCGAATAAGTTCACGATTGCCGGAATGGGTGAGGAGTTCGCCATCAACCTTGGGC
TGAACTACAAGCAGGTCGTCAATATCGGACTGATCATTGTTGCTTGTGTGACGTCCGTTGTGATTCTCACGGTAGGGGCG
ATTCCGTTTTTGGGACTTATCATTCCCAATCTGGTGACGCTGTACTTGGGGGACAACCTGAAGAAAAGCTTGTCTCATAC
CGCTTTGCTTGGCGCGGTGTTTGTACTGGCCTGTGATATCCTGGGACGCCTCATTATCTTCCCTTACGAGATTTCCATTG
GCTTGATGGTTGGGGTCATAGGCAGCGGGGTATTCGTGTACTTACTCATGAGAAGAAAGGCATATGAACAATGA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.952

98.738

0.543

Multiple sequence alignment