Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   G4G26_RS09710 Genome accession   NZ_CP049924
Coordinates   1929449..1931452 (+) Length   667 a.a.
NCBI ID   WP_015714012.1    Uniprot ID   -
Organism   Bacillus subtilis strain So1b     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1924449..1936452
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4G26_RS09675 (G4G26_09710) pghL 1924816..1925574 (+) 759 WP_015714006.1 gamma-polyglutamate hydrolase PghL -
  G4G26_RS09680 (G4G26_09715) - 1925601..1926050 (-) 450 WP_015714007.1 YndM family protein -
  G4G26_RS09685 (G4G26_09720) fosB 1926259..1926677 (+) 419 Protein_1863 metallothiol transferase FosB -
  G4G26_RS20925 - 1926601..1926940 (+) 340 Protein_1864 hypothetical protein -
  G4G26_RS09690 (G4G26_09725) dinR/lexA 1927227..1927844 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  G4G26_RS09695 (G4G26_09730) yneA 1927994..1928311 (+) 318 WP_015252003.1 cell division suppressor protein YneA -
  G4G26_RS09700 (G4G26_09735) dinL 1928330..1928983 (+) 654 WP_015714011.1 recombinase family protein -
  G4G26_RS09705 (G4G26_09740) ynzC 1929047..1929280 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  G4G26_RS09710 (G4G26_09745) recP/tkt 1929449..1931452 (+) 2004 WP_015714012.1 transketolase Machinery gene
  G4G26_RS09715 (G4G26_09750) sirA 1931605..1932051 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  G4G26_RS09720 (G4G26_09755) yneF 1932137..1932355 (+) 219 WP_003221221.1 YneF family protein -
  G4G26_RS09725 (G4G26_09760) ynzD 1932429..1932602 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  G4G26_RS09730 (G4G26_09765) ccdA 1932822..1933529 (+) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  G4G26_RS09735 (G4G26_09770) yneI 1933618..1933980 (+) 363 WP_003245707.1 response regulator -
  G4G26_RS09740 (G4G26_09775) yneJ 1934059..1934550 (+) 492 WP_074794556.1 CcdC family protein -
  G4G26_RS09745 (G4G26_09780) yneK 1934581..1935009 (-) 429 WP_015251998.1 DynA interaction protein YneK -
  G4G26_RS09750 (G4G26_09785) cotM 1935244..1935636 (-) 393 WP_015251997.1 outer spore coat protein CotM -
  G4G26_RS09755 (G4G26_09790) sspP 1935717..1935863 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  G4G26_RS09760 (G4G26_09795) sspO 1935895..1936041 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72300.39 Da        Isoelectric Point: 4.7291

>NTDB_id=375644 G4G26_RS09710 WP_015714012.1 1929449..1931452(+) (recP/tkt) [Bacillus subtilis strain So1b]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
AGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTSEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=375644 G4G26_RS09710 WP_015714012.1 1929449..1931452(+) (recP/tkt) [Bacillus subtilis strain So1b]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAGGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATTAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
GCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCGGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACATCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATCGCTTCCGGA
TCAGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACAGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCAGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562


Multiple sequence alignment