Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   G4G26_RS09690 Genome accession   NZ_CP049924
Coordinates   1927227..1927844 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain So1b     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1922227..1932844
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4G26_RS09665 (G4G26_09700) yndJ 1922558..1924198 (+) 1641 WP_182932296.1 YndJ family protein -
  G4G26_RS09670 (G4G26_09705) - 1924276..1924590 (+) 315 WP_029726671.1 hypothetical protein -
  G4G26_RS09675 (G4G26_09710) pghL 1924816..1925574 (+) 759 WP_015714006.1 gamma-polyglutamate hydrolase PghL -
  G4G26_RS09680 (G4G26_09715) - 1925601..1926050 (-) 450 WP_015714007.1 YndM family protein -
  G4G26_RS09685 (G4G26_09720) fosB 1926259..1926677 (+) 419 Protein_1863 metallothiol transferase FosB -
  G4G26_RS20925 - 1926601..1926940 (+) 340 Protein_1864 hypothetical protein -
  G4G26_RS09690 (G4G26_09725) dinR/lexA 1927227..1927844 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  G4G26_RS09695 (G4G26_09730) yneA 1927994..1928311 (+) 318 WP_015252003.1 cell division suppressor protein YneA -
  G4G26_RS09700 (G4G26_09735) dinL 1928330..1928983 (+) 654 WP_015714011.1 recombinase family protein -
  G4G26_RS09705 (G4G26_09740) ynzC 1929047..1929280 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  G4G26_RS09710 (G4G26_09745) recP/tkt 1929449..1931452 (+) 2004 WP_015714012.1 transketolase Machinery gene
  G4G26_RS09715 (G4G26_09750) sirA 1931605..1932051 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  G4G26_RS09720 (G4G26_09755) yneF 1932137..1932355 (+) 219 WP_003221221.1 YneF family protein -
  G4G26_RS09725 (G4G26_09760) ynzD 1932429..1932602 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=375643 G4G26_RS09690 WP_003238209.1 1927227..1927844(-) (dinR/lexA) [Bacillus subtilis strain So1b]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=375643 G4G26_RS09690 WP_003238209.1 1927227..1927844(-) (dinR/lexA) [Bacillus subtilis strain So1b]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment