Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   FP511_RS02205 Genome accession   NZ_CP042001
Coordinates   381058..382092 (+) Length   344 a.a.
NCBI ID   WP_000732713.1    Uniprot ID   A0AAV3JGP6
Organism   Streptococcus agalactiae strain GBS28     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 376058..387092
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FP511_RS02165 (FP511_02245) tsaE 376134..376577 (+) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FP511_RS02170 (FP511_02250) - 376570..377091 (+) 522 WP_000043146.1 GNAT family N-acetyltransferase -
  FP511_RS02175 (FP511_02255) - 377100..378407 (+) 1308 WP_000708156.1 LCP family protein -
  FP511_RS02180 (FP511_02260) - 378471..378767 (-) 297 WP_000690175.1 hypothetical protein -
  FP511_RS02185 (FP511_02265) - 378764..379183 (-) 420 WP_000368097.1 HIT family protein -
  FP511_RS02190 (FP511_02270) - 379519..380022 (+) 504 WP_000773453.1 hypothetical protein -
  FP511_RS02195 (FP511_02275) - 380074..380259 (-) 186 WP_000368100.1 hypothetical protein -
  FP511_RS02200 (FP511_02280) pptA 380331..381056 (+) 726 WP_000912307.1 ABC transporter ATP-binding protein Regulator
  FP511_RS02205 (FP511_02285) pptB 381058..382092 (+) 1035 WP_000732713.1 ABC transporter permease Regulator
  FP511_RS02210 (FP511_02290) ccrZ 382150..382950 (+) 801 WP_000155919.1 cell cycle regulator CcrZ -
  FP511_RS02215 (FP511_02295) trmB 382940..383575 (+) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FP511_RS02225 (FP511_02305) rimP 384065..384541 (+) 477 WP_041971671.1 ribosome maturation factor RimP -
  FP511_RS02230 (FP511_02310) nusA 384577..385728 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  FP511_RS02235 (FP511_02315) rnpM 385750..386046 (+) 297 WP_001140526.1 RNase P modulator RnpM -
  FP511_RS02240 (FP511_02320) - 386039..386341 (+) 303 WP_001065560.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40206.54 Da        Isoelectric Point: 10.4988

>NTDB_id=375461 FP511_RS02205 WP_000732713.1 381058..382092(+) (pptB) [Streptococcus agalactiae strain GBS28]
MKKLFNKRRSLFLTQNSKYLRYVFNDHFVLVLMFLSGFLLYQYSQLLKDFPKTHWPIIVIVSIIILMLLAMGGIASYLEP
ADKQFLLIKEEAIKEIINSAKKRTYIFWLVIQTLFLVLISPILIKLGLSVFMITLLIFGLGIIKWLVITYKVKVFYNNQN
LNWDAAINHEQERKQSILKFFSLFTNVKGISTSVKRRSFLDGILKLISKTPSRLWTNLFVRAFLRSSDYLGLTIRLVTLN
ILSVIFVNETYLALALAFVFNYLLLFQLLALGHHFDYQYMNQLYPVRLNAKASQLKGFLRVLSYAVTVIDSILIRELKPV
ILLIVLMLIVTEYYIPYKIKKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=375461 FP511_RS02205 WP_000732713.1 381058..382092(+) (pptB) [Streptococcus agalactiae strain GBS28]
ATGAAAAAGTTATTTAATAAACGTCGAAGTCTCTTTTTAACTCAAAATAGTAAATATTTGAGATACGTCTTTAACGATCA
TTTTGTATTAGTATTAATGTTTTTGTCAGGTTTTTTGTTATATCAGTATAGCCAGTTACTAAAAGACTTTCCAAAAACAC
ATTGGCCAATTATCGTGATTGTGTCAATCATTATCTTAATGTTACTAGCGATGGGGGGAATAGCCAGCTATTTAGAACCG
GCTGATAAACAATTTTTACTTATAAAAGAAGAAGCAATAAAGGAAATTATAAATTCTGCTAAAAAACGGACTTATATCTT
TTGGTTGGTTATTCAAACCTTATTTTTAGTATTAATATCACCAATTTTGATAAAGTTAGGCTTGTCAGTTTTTATGATTA
CATTGTTAATTTTTGGTCTAGGAATAATCAAATGGTTGGTAATAACTTACAAGGTAAAGGTCTTTTATAACAATCAAAAT
TTGAACTGGGATGCAGCTATAAATCATGAGCAGGAAAGAAAACAGAGTATATTAAAATTTTTCTCTTTGTTTACAAATGT
TAAAGGAATTTCGACAAGTGTAAAACGTCGTTCATTTTTAGATGGTATTTTAAAACTTATTTCTAAAACGCCATCGCGTT
TATGGACTAACTTATTTGTGAGGGCATTTCTAAGAAGCTCAGATTATCTTGGTTTAACAATAAGGTTGGTAACTTTAAAT
ATCTTATCAGTCATCTTTGTTAACGAAACCTACCTCGCCCTTGCTCTGGCATTTGTATTTAACTACTTATTATTGTTCCA
ACTATTAGCTTTAGGTCACCATTTTGATTATCAATACATGAATCAGCTCTATCCAGTTAGATTAAATGCTAAAGCAAGTC
AGCTAAAAGGTTTTCTCAGAGTATTATCATATGCTGTGACAGTAATTGATAGCATACTTATAAGAGAATTGAAACCTGTT
ATATTATTGATAGTTTTGATGTTAATTGTGACGGAATATTACATCCCTTACAAAATAAAGAAGATGATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.547

100

0.485

  pptB Streptococcus salivarius strain HSISS4

48.256

100

0.483


Multiple sequence alignment