Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | G9W35_RS00315 | Genome accession | NZ_CP049845 |
| Coordinates | 72776..73216 (+) | Length | 146 a.a. |
| NCBI ID | WP_000360904.1 | Uniprot ID | P36647 |
| Organism | Escherichia coli strain UPEC-245U/190328 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 67776..78216
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G9W35_RS00295 (G9W35_00290) | aroP | 68774..70147 (+) | 1374 | WP_074499820.1 | aromatic amino acid transporter AroP | - |
| G9W35_RS00300 (G9W35_00295) | ampE | 70190..71044 (-) | 855 | WP_000172005.1 | beta-lactamase regulator AmpE | - |
| G9W35_RS00305 (G9W35_00300) | ampD | 71041..71592 (-) | 552 | WP_074499818.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| G9W35_RS00310 (G9W35_00305) | nadC | 71680..72573 (+) | 894 | WP_001135174.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| G9W35_RS00315 (G9W35_00310) | pilA | 72776..73216 (+) | 441 | WP_000360904.1 | prepilin peptidase-dependent pilin | Machinery gene |
| G9W35_RS00320 (G9W35_00315) | pilB | 73226..74611 (+) | 1386 | WP_074499817.1 | type II secretion system protein GspE | Machinery gene |
| G9W35_RS00325 (G9W35_00320) | hofC | 74601..75803 (+) | 1203 | WP_000157235.1 | protein transport protein HofC | - |
| G9W35_RS00330 (G9W35_00325) | guaC | 75838..76881 (-) | 1044 | WP_001217338.1 | GMP reductase | - |
| G9W35_RS00335 | - | 77037..77081 (-) | 45 | WP_120795372.1 | protein YacM | - |
| G9W35_RS00340 (G9W35_00330) | coaE | 77106..77726 (+) | 621 | WP_074499815.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15621.75 Da Isoelectric Point: 4.3938
>NTDB_id=375401 G9W35_RS00315 WP_000360904.1 72776..73216(+) (pilA) [Escherichia coli strain UPEC-245U/190328]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=375401 G9W35_RS00315 WP_000360904.1 72776..73216(+) (pilA) [Escherichia coli strain UPEC-245U/190328]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |