Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   FP509_RS02590 Genome accession   NZ_CP041999
Coordinates   435310..436344 (+) Length   344 a.a.
NCBI ID   WP_000732713.1    Uniprot ID   A0AAV3JGP6
Organism   Streptococcus agalactiae strain GBS11     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 430310..441344
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FP509_RS02550 (FP509_02610) tsaE 430386..430829 (+) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FP509_RS02555 (FP509_02615) - 430822..431343 (+) 522 WP_000043146.1 GNAT family N-acetyltransferase -
  FP509_RS02560 (FP509_02620) - 431352..432659 (+) 1308 WP_000708156.1 LCP family protein -
  FP509_RS02565 (FP509_02625) - 432723..433019 (-) 297 WP_000690175.1 hypothetical protein -
  FP509_RS02570 (FP509_02630) - 433016..433435 (-) 420 WP_000368097.1 HIT family protein -
  FP509_RS02575 (FP509_02635) - 433771..434274 (+) 504 WP_000773453.1 hypothetical protein -
  FP509_RS02580 (FP509_02640) - 434326..434511 (-) 186 WP_000368100.1 hypothetical protein -
  FP509_RS02585 (FP509_02645) pptA 434583..435308 (+) 726 WP_000912307.1 ABC transporter ATP-binding protein Regulator
  FP509_RS02590 (FP509_02650) pptB 435310..436344 (+) 1035 WP_000732713.1 ABC transporter permease Regulator
  FP509_RS02595 (FP509_02655) ccrZ 436402..437202 (+) 801 WP_000155919.1 cell cycle regulator CcrZ -
  FP509_RS02600 (FP509_02660) trmB 437192..437827 (+) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FP509_RS02615 (FP509_02680) rimP 439178..439654 (+) 477 WP_041971671.1 ribosome maturation factor RimP -
  FP509_RS02620 (FP509_02685) nusA 439690..440841 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  FP509_RS02625 (FP509_02690) rnpM 440863..441159 (+) 297 WP_001140526.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40206.54 Da        Isoelectric Point: 10.4988

>NTDB_id=375355 FP509_RS02590 WP_000732713.1 435310..436344(+) (pptB) [Streptococcus agalactiae strain GBS11]
MKKLFNKRRSLFLTQNSKYLRYVFNDHFVLVLMFLSGFLLYQYSQLLKDFPKTHWPIIVIVSIIILMLLAMGGIASYLEP
ADKQFLLIKEEAIKEIINSAKKRTYIFWLVIQTLFLVLISPILIKLGLSVFMITLLIFGLGIIKWLVITYKVKVFYNNQN
LNWDAAINHEQERKQSILKFFSLFTNVKGISTSVKRRSFLDGILKLISKTPSRLWTNLFVRAFLRSSDYLGLTIRLVTLN
ILSVIFVNETYLALALAFVFNYLLLFQLLALGHHFDYQYMNQLYPVRLNAKASQLKGFLRVLSYAVTVIDSILIRELKPV
ILLIVLMLIVTEYYIPYKIKKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=375355 FP509_RS02590 WP_000732713.1 435310..436344(+) (pptB) [Streptococcus agalactiae strain GBS11]
ATGAAAAAGTTATTTAATAAACGTCGAAGTCTCTTTTTAACTCAAAATAGTAAATATTTGAGATACGTCTTTAACGATCA
TTTTGTATTAGTATTAATGTTTTTGTCAGGTTTTTTGTTATATCAGTATAGCCAGTTACTAAAAGACTTTCCAAAAACAC
ATTGGCCAATTATCGTGATTGTGTCAATCATTATCTTAATGTTACTAGCGATGGGGGGAATAGCCAGCTATTTAGAACCG
GCTGATAAACAATTTTTACTTATAAAAGAAGAAGCAATAAAGGAAATTATAAATTCTGCTAAAAAACGGACTTATATCTT
TTGGTTGGTTATTCAAACCTTATTTTTAGTATTAATATCACCAATTTTGATAAAGTTAGGCTTGTCAGTTTTTATGATTA
CATTGTTAATTTTTGGTCTAGGAATAATCAAATGGTTGGTAATAACTTACAAGGTAAAGGTCTTTTATAACAATCAAAAT
TTGAACTGGGATGCAGCTATAAATCATGAGCAGGAAAGAAAACAGAGTATATTAAAATTTTTCTCTTTGTTTACAAATGT
TAAAGGAATTTCGACAAGTGTAAAACGTCGTTCATTTTTAGATGGTATTTTAAAACTTATTTCTAAAACGCCATCGCGTT
TATGGACTAACTTATTTGTGAGGGCATTTCTAAGAAGCTCAGATTATCTTGGTTTAACAATAAGGTTGGTAACTTTAAAT
ATCTTATCAGTCATCTTTGTTAACGAAACCTACCTCGCCCTTGCTCTGGCATTTGTATTTAACTACTTATTATTGTTCCA
ACTATTAGCTTTAGGTCACCATTTTGATTATCAATACATGAATCAGCTCTATCCAGTTAGATTAAATGCTAAAGCAAGTC
AGCTAAAAGGTTTTCTCAGAGTATTATCATATGCTGTGACAGTAATTGATAGCATACTTATAAGAGAATTGAAACCTGTT
ATATTATTGATAGTTTTGATGTTAATTGTGACGGAATATTACATCCCTTACAAAATAAAGAAGATGATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.547

100

0.485

  pptB Streptococcus salivarius strain HSISS4

48.256

100

0.483


Multiple sequence alignment