Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   FPT06_RS05265 Genome accession   NZ_CP041994
Coordinates   1034140..1034904 (-) Length   254 a.a.
NCBI ID   WP_004194534.1    Uniprot ID   A0A126UJW8
Organism   Streptococcus suis strain INT-01     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1029140..1039904
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPT06_RS05240 (FPT06_05240) - 1029479..1029844 (-) 366 WP_004194339.1 helix-turn-helix domain-containing protein -
  FPT06_RS05245 (FPT06_05245) - 1029948..1030151 (-) 204 WP_013730048.1 DUF951 domain-containing protein -
  FPT06_RS05250 (FPT06_05250) - 1030161..1031030 (-) 870 WP_013730047.1 diacylglycerol kinase family protein -
  FPT06_RS05255 (FPT06_05255) dnaN 1031274..1032410 (-) 1137 WP_004194538.1 DNA polymerase III subunit beta -
  FPT06_RS05260 (FPT06_05260) dnaA 1032564..1033937 (-) 1374 WP_004194536.1 chromosomal replication initiator protein DnaA -
  FPT06_RS05265 (FPT06_05265) spo0J 1034140..1034904 (-) 765 WP_004194534.1 ParB/RepB/Spo0J family partition protein Regulator
  FPT06_RS05270 (FPT06_05270) htrA 1034965..1036161 (-) 1197 WP_009911075.1 S1C family serine protease Regulator
  FPT06_RS05275 (FPT06_05275) rlmH 1036335..1036814 (+) 480 WP_004194528.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FPT06_RS05280 (FPT06_05280) - 1036839..1037522 (+) 684 WP_004194526.1 YoaK family protein -

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 28993.28 Da        Isoelectric Point: 9.4760

>NTDB_id=375233 FPT06_RS05265 WP_004194534.1 1034140..1034904(-) (spo0J) [Streptococcus suis strain INT-01]
MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKE
LTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGKISQGHA
RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGEIRINF
NDLDEFERIINNFK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=375233 FPT06_RS05265 WP_004194534.1 1034140..1034904(-) (spo0J) [Streptococcus suis strain INT-01]
ATGGAAGAATTACGTACACTAAATATTTCAGAAATCCATCCCAATCCCTATCAGCCAAGAATTCATTTTGATGAAAAGGA
GCTACTTGAGCTCGCTCAATCTATTAAGGAAAATGGCTTAATTCAACCGATTATTGTAAGAAAATCTTCTATTATCGGAT
ACGAATTATTAGCTGGAGAAAGAAGGTTGCGAGCCAGTCAATTAGCTGGACTGACTACAATACCAGCAGTGGTAAAGGAA
CTAACTGATGATGATTTACTCTATCAGGCTATCATAGAGAATCTGCAGCGTTCTAACTTAAATCCGATAGAAGAAGCAGC
CTCTTATCAAAAATTGATTAGTAGAGGGTTAACACATGATGAAGTTGCTCAAATCATGGGAAAATCAAGACCATATATCA
GTAATTTATTGCGCCTACTAAATCTATCATCTCAGACTAAACAAGCTGTAGAAGAAGGAAAAATTTCACAAGGGCACGCG
CGACAATTGGTGTCATTTTCAGAAGAAAAGCAAGCCGAATGGGTTCAACTCATTTTATCAAAGGATTTAAGTGTGCGTAC
GCTTGAAAAATTAATAGCTGCAAATAAGAAAAAACACACTAAGCTTAAACAACGCGACCAATTTTTAAAAGAACAGGAAG
ATTCACTCAGTAAAACTCTTGGAACAGCTACAAAAATTATCAAGAAGAAAAACGGGAGCGGAGAAATTCGGATTAACTTT
AATGACCTCGATGAATTCGAAAGAATTATCAACAATTTTAAATAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-94)

HTH domain found in ParB protein (HTH_ParB)

(146-193)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A126UJW8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.762

99.213

0.543

Multiple sequence alignment