Detailed information    

insolico Bioinformatically predicted

Overview

Name   recP/tkt   Type   Machinery gene
Locus tag   G8B35_RS02345 Genome accession   NZ_CP049697
Coordinates   456083..458068 (+) Length   661 a.a.
NCBI ID   WP_021299077.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain ABC3     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 451083..463068
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8B35_RS02325 (G8B35_02335) - 451454..452155 (+) 702 WP_011528880.1 MIP/aquaporin family protein -
  G8B35_RS02330 (G8B35_02340) - 452264..453610 (+) 1347 WP_021299079.1 FAD/NAD(P)-binding oxidoreductase -
  G8B35_RS02335 (G8B35_02345) - 453600..455099 (+) 1500 WP_021299060.1 helix-turn-helix domain-containing protein -
  G8B35_RS02340 (G8B35_02350) fsa 455221..455865 (+) 645 WP_002983569.1 fructose-6-phosphate aldolase -
  G8B35_RS02345 (G8B35_02355) recP/tkt 456083..458068 (+) 1986 WP_021299077.1 transketolase Machinery gene
  G8B35_RS02350 (G8B35_02360) - 458260..458526 (+) 267 WP_002983572.1 bacteriocin immunity protein -
  G8B35_RS02355 (G8B35_02365) - 458560..459294 (+) 735 WP_011528875.1 ABC transporter ATP-binding protein -
  G8B35_RS02360 (G8B35_02370) - 459299..460927 (+) 1629 WP_021299069.1 membrane protein -
  G8B35_RS02365 (G8B35_02375) proB 460991..461812 (+) 822 WP_003052230.1 glutamate 5-kinase -
  G8B35_RS02370 (G8B35_02380) - 461805..463055 (+) 1251 WP_021299082.1 glutamate-5-semialdehyde dehydrogenase -

Sequence

Protein


Download         Length: 661 a.a.        Molecular weight: 71398.13 Da        Isoelectric Point: 4.6233

>NTDB_id=375158 G8B35_RS02345 WP_021299077.1 456083..458068(+) (recP/tkt) [Streptococcus pyogenes strain ABC3]
MTFDAIDQLAVNTVRTLSMDAIQAANSGHPGLPMGAAPMAYVLWNHFMNINPKTSRNWSNRDRFILSAGHGSAMLYSLLH
LAGYDLTVEDLKNFRQWGSKTPGHPEVNHTDGVEATTGPLGQGIANAVGMAMAEAHLAAKFNKPGFDIVDHYTFALNGDG
DLMEGVSQEAASMAGHLKLGKLVLLYDSNDISLDGPTSMAFTEDVKGRFEAYGWQHILVKDGNDLEEIAAAIEAAKAETE
KPTIIEVKTIIGFGAEKQGTSAVHGAPLGAEGIAFAKKAYQWTHQDFEVPAEVTERFAQGLQARGEKAEQAWNDLFAAYE
AEYPELAAEYQKAFTNEAAQVELEAHELGSSMASRVSSQQAIQQISEQVASFWGGSADLSASNNTMVKAETDFQSGHYEG
RNIWFGVREFAMAAAMNGIALHGGTRVYGGTFFVFSNYLLPAVRMAALQNLPTVYVMTHDSIAVGEDGPTHEPIEQLASV
RSMPNLNVIRPADGNETNTAWKRAIAETDRPTMLVLTRQNLPVLEGTKELAEDGLNKGAYILSEAKGDLDGIIIATGSEV
KLAMDTQEALEAEGIHVRVVSMPSQNIFDEQSAEYKESILPAAVTKRLAIEAGSSFGWAKYVGLAGKTLTIDTWGASAPG
NRIFEEYGFTVANATELYKSL

Nucleotide


Download         Length: 1986 bp        

>NTDB_id=375158 G8B35_RS02345 WP_021299077.1 456083..458068(+) (recP/tkt) [Streptococcus pyogenes strain ABC3]
ATGACATTTGATGCAATTGACCAGTTGGCAGTAAATACTGTCCGCACCCTATCAATGGATGCCATTCAAGCGGCAAATTC
TGGACACCCAGGCCTTCCAATGGGTGCTGCACCTATGGCCTACGTTCTTTGGAATCACTTCATGAACATTAATCCAAAAA
CAAGCCGTAATTGGTCAAACAGAGACCGTTTTATCCTATCAGCGGGACACGGAAGTGCTATGCTTTATAGCTTGTTACAC
TTAGCTGGTTATGATTTAACTGTAGAAGATTTAAAGAACTTCCGTCAATGGGGTTCTAAAACACCAGGTCACCCAGAAGT
TAATCATACCGATGGTGTGGAAGCAACTACAGGACCTCTTGGTCAAGGGATTGCGAATGCTGTTGGTATGGCCATGGCAG
AAGCTCACCTAGCAGCTAAATTTAACAAACCAGGCTTTGACATCGTTGATCACTATACCTTTGCTTTGAATGGTGACGGT
GACCTTATGGAAGGGGTCAGCCAAGAAGCAGCAAGTATGGCAGGACATTTAAAACTTGGGAAATTGGTCTTGCTATATGA
TTCAAACGACATCTCTCTTGATGGTCCAACCTCTATGGCTTTCACAGAAGATGTGAAAGGACGTTTTGAAGCTTATGGTT
GGCAACATATCCTTGTGAAAGACGGAAACGATTTAGAAGAAATTGCAGCTGCTATTGAAGCAGCTAAAGCTGAAACTGAG
AAACCAACCATCATCGAAGTTAAAACCATTATTGGTTTTGGTGCCGAAAAACAAGGAACTTCAGCTGTTCACGGCGCTCC
TCTTGGAGCAGAAGGCATTGCTTTTGCCAAAAAAGCTTACCAATGGACTCATCAAGATTTTGAAGTGCCTGCTGAAGTAA
CAGAGCGCTTTGCTCAAGGTCTTCAAGCGCGTGGTGAAAAAGCAGAACAAGCCTGGAATGACTTGTTTGCAGCTTATGAA
GCAGAATATCCAGAATTAGCAGCAGAATACCAAAAAGCCTTTACTAACGAAGCTGCTCAAGTAGAACTTGAAGCGCACGA
ACTTGGTAGTTCAATGGCGAGTCGTGTATCCAGTCAACAAGCCATCCAACAAATTTCAGAACAAGTAGCCTCTTTCTGGG
GTGGGTCAGCAGACCTTTCAGCTTCAAACAATACTATGGTTAAGGCTGAAACAGATTTCCAATCAGGTCACTACGAAGGC
CGTAACATCTGGTTTGGCGTTCGTGAATTTGCCATGGCTGCAGCCATGAACGGTATTGCCCTTCACGGCGGGACACGCGT
TTACGGCGGAACCTTCTTTGTCTTCTCAAACTATCTTCTTCCAGCTGTTCGTATGGCAGCGCTCCAAAATTTGCCAACAG
TTTATGTCATGACACATGATTCTATCGCTGTTGGTGAAGATGGGCCAACGCACGAACCAATTGAACAATTGGCAAGTGTT
CGCTCAATGCCTAACTTGAACGTTATTCGTCCAGCAGACGGTAACGAAACAAATACTGCTTGGAAACGTGCCATTGCTGA
AACAGATCGCCCAACTATGCTTGTATTGACGCGTCAAAACCTTCCAGTGCTTGAAGGAACAAAAGAATTGGCAGAAGATG
GTCTTAACAAAGGAGCTTACATTTTATCAGAAGCCAAAGGCGACCTTGATGGTATCATCATTGCAACAGGTTCAGAAGTG
AAACTGGCAATGGATACTCAAGAAGCTCTTGAAGCAGAAGGCATTCATGTGCGTGTGGTATCTATGCCATCACAAAATAT
CTTTGACGAACAGTCAGCAGAGTATAAAGAAAGCATCCTACCAGCAGCTGTGACTAAACGTCTCGCTATCGAAGCAGGTT
CAAGCTTTGGCTGGGCAAAATATGTCGGCCTAGCAGGAAAAACATTGACCATTGACACTTGGGGTGCTTCAGCTCCAGGA
AATCGTATCTTCGAAGAATATGGTTTCACTGTGGCAAATGCAACTGAGTTATACAAATCACTCTAG

Domains

Predicted by InterProScan.

Transketolase, pyrimidine binding domain (Transket_pyr)

(352-522)

Transketolase, thiamine diphosphate binding domain (Transketolase_N)

(6-335)

Transketolase, C-terminal domain (Transketolase_C)

(552-652)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

55.319

99.546

0.551

Multiple sequence alignment