Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   G8B35_RS02140 Genome accession   NZ_CP049697
Coordinates   415176..416210 (+) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain ABC3     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 410176..421210
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8B35_RS02110 (G8B35_02110) tsaE 411241..411702 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  G8B35_RS02115 (G8B35_02115) - 411677..412201 (+) 525 WP_002994338.1 GNAT family N-acetyltransferase -
  G8B35_RS02120 (G8B35_02120) - 412210..413493 (+) 1284 WP_002983372.1 LCP family protein -
  G8B35_RS02125 (G8B35_02125) - 413604..413960 (-) 357 WP_002983373.1 hypothetical protein -
  G8B35_RS02130 (G8B35_02130) - 413957..414376 (-) 420 WP_002983376.1 HIT family protein -
  G8B35_RS02135 (G8B35_02135) pptA 414448..415173 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  G8B35_RS02140 (G8B35_02140) pptB 415176..416210 (+) 1035 WP_010922583.1 ABC transporter permease Regulator
  G8B35_RS02145 (G8B35_02145) ccrZ 416274..417065 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  G8B35_RS02150 (G8B35_02150) trmB 417065..417700 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  G8B35_RS02160 (G8B35_02160) rimP 417959..418495 (+) 537 WP_011528897.1 ribosome maturation factor RimP -
  G8B35_RS02165 (G8B35_02165) nusA 418670..419827 (+) 1158 WP_002983485.1 transcription termination factor NusA -
  G8B35_RS02170 (G8B35_02170) rnpM 419843..420139 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  G8B35_RS02175 (G8B35_02175) - 420132..420434 (+) 303 WP_002983488.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=375157 G8B35_RS02140 WP_010922583.1 415176..416210(+) (pptB) [Streptococcus pyogenes strain ABC3]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=375157 G8B35_RS02140 WP_010922583.1 415176..416210(+) (pptB) [Streptococcus pyogenes strain ABC3]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427