Detailed information NTG0375120

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: G8B36_RS09395
• Genome accession: NZ_CP049696
• Coordinates: 1875238..1876344 (+)
• Length: 368 a.a.
• NCBI ID: WP_011529146.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain ABC25
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1870238..1881344

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G8B36_RS09370 (G8B36_09455)	pgsA	1870347..1870889 (-)	543	WP_011185104.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
G8B36_RS09375 (G8B36_09460)	-	1870903..1871928 (-)	1026	WP_011529142.1	RodZ family helix-turn-helix domain-containing protein	-
G8B36_RS09380 (G8B36_09465)	yfmH	1871978..1873267 (-)	1290	WP_011529143.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
G8B36_RS09385 (G8B36_09470)	yfmF	1873269..1874513 (-)	1245	WP_011529144.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
G8B36_RS09390 (G8B36_09475)	yaaA	1874823..1875236 (+)	414	WP_021299130.1	S4 domain-containing protein YaaA	-
G8B36_RS09395 (G8B36_09480)	recF	1875238..1876344 (+)	1107	WP_011529146.1	DNA replication/repair protein RecF	Machinery gene
G8B36_RS09400 (G8B36_09485)	-	1876400..1877263 (-)	864	WP_060388547.1	GRP family sugar transporter	-
G8B36_RS09405 (G8B36_09490)	guaB	1877466..1878947 (-)	1482	WP_011529148.1	IMP dehydrogenase	-
G8B36_RS09410 (G8B36_09495)	trpS	1879255..1880277 (-)	1023	WP_011529149.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41844.78 Da
• Isoelectric Point: 7.8294

>NTDB_id=375120 G8B36_RS09395 WP_011529146.1 1875238..1876344(+) (recF) [Streptococcus pyogenes strain ABC25]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRISGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLFELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLASYGARVMEHRIDFINALEKEANTHHQAISNGLESLSLSYQSSVVFDKKTSIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFHVTKGTVQVDSDIH

Nucleotide

• Length: 1107 bp

>NTDB_id=375120 G8B36_RS09395 WP_011529146.1 1875238..1876344(+) (recF) [Streptococcus pyogenes strain ABC25]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCGTCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAGATTCAGCGTATTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGTGTGACAAAGATTAATGCGCTAAAGCAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTCGCACCAGAAGATTTGCAACTAGTTAAGGGAGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAGCCTGTTTACTTATTTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAACAAATTGATGCCGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTAGCTATGGAGC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCGTTAGAGAAAGAAGCAAATACTCATCACCAAGCCATCTCAAATG
GTTTAGAAAGTCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAAAACTAGTATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAACACTAGTGTTGGTCCACATCGCGATGACTTAGCCTTTTA
CATTAACGGGATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAGGCCTTGACTGGAGATAATCCCATTCTTTTACTAGACGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTTCACGTGACAAAAGGAACCGTTCAAGTTGATTCTGACATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	62.568	99.457	0.622
recF	Bacillus subtilis subsp. subtilis str. 168	45.013	100	0.454