Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   FPL13_RS07305 Genome accession   NZ_CP041968
Coordinates   1513156..1514202 (-) Length   348 a.a.
NCBI ID   WP_049514339.1    Uniprot ID   A0A7L8W6I4
Organism   Streptococcus sp. KS 6     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1508156..1519202
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPL13_RS07280 (FPL13_07370) nusA 1508340..1509533 (-) 1194 WP_049514334.1 transcription termination factor NusA -
  FPL13_RS07285 (FPL13_07375) rimP 1509584..1510072 (-) 489 WP_049514335.1 ribosome maturation factor RimP -
  FPL13_RS07290 (FPL13_07380) - 1510320..1511009 (-) 690 WP_026248194.1 VIT family protein -
  FPL13_RS07295 (FPL13_07390) trmB 1511676..1512311 (-) 636 WP_049514336.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FPL13_RS07300 (FPL13_07395) ccrZ 1512308..1513105 (-) 798 WP_049514337.1 cell cycle regulator CcrZ -
  FPL13_RS07305 (FPL13_07400) pptB 1513156..1514202 (-) 1047 WP_049514339.1 ABC transporter permease Regulator
  FPL13_RS07310 (FPL13_07405) pptA 1514199..1514930 (-) 732 WP_003025975.1 ABC transporter ATP-binding protein Regulator
  FPL13_RS07315 (FPL13_07410) - 1514999..1515409 (+) 411 WP_003025977.1 HIT family protein -
  FPL13_RS07320 (FPL13_07415) - 1515419..1515706 (+) 288 WP_049514340.1 hypothetical protein -
  FPL13_RS07325 (FPL13_07420) brpA 1515753..1516868 (-) 1116 WP_049514342.1 biofilm formation/cell division transcriptional regulator BrpA -
  FPL13_RS07330 (FPL13_07425) - 1516875..1517396 (-) 522 WP_186832779.1 GNAT family N-acetyltransferase -
  FPL13_RS07335 (FPL13_07430) tsaE 1517389..1517829 (-) 441 WP_049514344.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40935.29 Da        Isoelectric Point: 10.3649

>NTDB_id=375024 FPL13_RS07305 WP_049514339.1 1513156..1514202(-) (pptB) [Streptococcus sp. KS 6]
MRELFQKRKQVFRNQCLKYSRYVFNDHFVLFLLVFTGFLAVQYSQLLRNLPSNHLPIILALAVLLILLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQEQTRLSYRLWVLLQTVVLLLLVPLFLALGMPLWGWFILVFLMLIAKWFVFLQKSQKFYQGAG
VNWSYLIAYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNMYLRSYLRNGDFLALTIRLLFLS
LLGIGFISQSWIAAIFVALLNYLLLFQLTALYHAFDYQYLTFLFPLEINSKLKGVKQVIALIGYSVLFVEIMMALLFFQD
RVALLFMIGITLLLYVIYLPFKLRSLVD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=375024 FPL13_RS07305 WP_049514339.1 1513156..1514202(-) (pptB) [Streptococcus sp. KS 6]
ATGAGAGAACTGTTTCAAAAGCGCAAACAAGTATTTCGCAATCAATGTTTGAAGTATTCGCGCTATGTTTTTAACGACCA
TTTTGTCCTCTTTTTATTAGTTTTTACTGGCTTTTTAGCTGTTCAATACAGTCAGTTGTTGCGAAATTTACCTTCAAATC
ACCTGCCAATCATTCTTGCTTTAGCAGTTCTTTTGATTTTATTGTTGCCTCTGGGACGAATCGCAACATATATGGAAAAA
CCAGATAGTCTATTTTTATTGGTCAAAGAAGAGGAATTAAAAAGCTACCTACAAGAACAAACGCGTTTATCTTATCGGTT
ATGGGTCTTGCTTCAAACTGTTGTGTTGTTACTATTAGTACCGCTTTTTCTTGCCTTAGGCATGCCGCTTTGGGGCTGGT
TTATTCTTGTTTTTCTTATGTTGATAGCAAAATGGTTCGTATTTTTGCAGAAAAGTCAAAAATTTTACCAAGGTGCAGGG
GTGAATTGGAGCTATCTCATTGCTTACGAAGAAAGACGCAAGCAGACAATCCTACGTTTCTTTGCTCTCTTTACCAACGT
TAAGGGAATTTCCAATAGCGTAAAACGCCGAGCATATCTTGATGGTTTGACGAATATTCTACCAAAAAGACAGTCAACTA
CTTGGCAAAATATGTATTTGCGTTCTTATTTGCGCAATGGTGATTTTCTTGCCTTGACTATACGGTTGCTGTTTCTGTCT
CTTTTGGGAATTGGTTTTATCAGTCAATCGTGGATTGCTGCCATATTTGTGGCATTGTTAAATTATCTCCTGCTATTTCA
GTTGACAGCCTTGTACCATGCCTTTGATTACCAATATTTGACGTTCTTATTCCCTTTAGAAATCAATTCAAAGTTAAAAG
GAGTGAAACAAGTGATTGCTCTTATTGGCTACAGCGTGCTTTTTGTGGAAATAATGATGGCTTTGCTGTTTTTCCAAGAT
AGAGTAGCTTTGCTTTTTATGATAGGAATCACATTGCTACTCTATGTCATTTATTTACCATTCAAATTAAGAAGTTTGGT
TGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7L8W6I4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.276

100

0.483

  pptB Streptococcus salivarius strain HSISS4

47.126

100

0.471


Multiple sequence alignment