Detailed information NTG0374926

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: G8B38_RS09165
• Genome accession: NZ_CP049694
• Coordinates: 1850516..1851622 (+)
• Length: 368 a.a.
• NCBI ID: WP_011529146.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain ABC122
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1845516..1856622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G8B38_RS09140 (G8B38_09215)	pgsA	1845625..1846167 (-)	543	WP_011185104.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
G8B38_RS09145 (G8B38_09220)	-	1846181..1847206 (-)	1026	WP_011529142.1	RodZ family helix-turn-helix domain-containing protein	-
G8B38_RS09150 (G8B38_09225)	yfmH	1847256..1848545 (-)	1290	WP_011529143.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
G8B38_RS09155 (G8B38_09230)	yfmF	1848547..1849791 (-)	1245	WP_011529144.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
G8B38_RS09160 (G8B38_09235)	yaaA	1850101..1850514 (+)	414	WP_021299130.1	S4 domain-containing protein YaaA	-
G8B38_RS09165 (G8B38_09240)	recF	1850516..1851622 (+)	1107	WP_011529146.1	DNA replication/repair protein RecF	Machinery gene
G8B38_RS09170 (G8B38_09245)	-	1851678..1852541 (-)	864	WP_060388547.1	GRP family sugar transporter	-
G8B38_RS09175 (G8B38_09250)	guaB	1852744..1854225 (-)	1482	WP_011529148.1	IMP dehydrogenase	-
G8B38_RS09180 (G8B38_09255)	trpS	1854533..1855555 (-)	1023	WP_011529149.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41844.78 Da
• Isoelectric Point: 7.8294

>NTDB_id=374926 G8B38_RS09165 WP_011529146.1 1850516..1851622(+) (recF) [Streptococcus pyogenes strain ABC122]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRISGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLFELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLASYGARVMEHRIDFINALEKEANTHHQAISNGLESLSLSYQSSVVFDKKTSIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFHVTKGTVQVDSDIH

Nucleotide

• Length: 1107 bp

>NTDB_id=374926 G8B38_RS09165 WP_011529146.1 1850516..1851622(+) (recF) [Streptococcus pyogenes strain ABC122]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCGTCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAGATTCAGCGTATTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGTGTGACAAAGATTAATGCGCTAAAGCAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTCGCACCAGAAGATTTGCAACTAGTTAAGGGAGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAGCCTGTTTACTTATTTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAACAAATTGATGCCGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTAGCTATGGAGC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCGTTAGAGAAAGAAGCAAATACTCATCACCAAGCCATCTCAAATG
GTTTAGAAAGTCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAAAACTAGTATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAACACTAGTGTTGGTCCACATCGCGATGACTTAGCCTTTTA
CATTAACGGGATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAGGCCTTGACTGGAGATAATCCCATTCTTTTACTAGACGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTTCACGTGACAAAAGGAACCGTTCAAGTTGATTCTGACATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	62.568	99.457	0.622
recF	Bacillus subtilis subsp. subtilis str. 168	45.013	100	0.454